RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CCNB1IP1Q9NPC3 277 aa17.75■□□□□ 0.43
SDCBP-209ENST00000522243 MAN2C1Q9NTJ4 1040 aa17.75■□□□□ 0.43
SDCBP-209ENST00000522243 TAAR3PQ9P1P4 343 aa17.75■□□□□ 0.43
SDCBP-209ENST00000522243 AP3M1Q9Y2T2 418 aa17.75■□□□□ 0.43
SDCBP-209ENST00000522243 UGT2A1Q9Y4X1 527 aa17.75■□□□□ 0.43
SDCBP-209ENST00000522243 TRAV27A0A087WT01 109 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 SLC22A23A1A5C7 686 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 FFAR1O14842 300 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 PHF1O43189 567 aaPredicted RBP17.74■□□□□ 0.43
SDCBP-209ENST00000522243 CCDC22O60826 627 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 NCR1O76036 304 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 PTHP01270 115 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 ZNF32P17041 273 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 CCNOP22674 350 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 MRPS34P82930 218 aaKnown RBP17.74■□□□□ 0.43
SDCBP-209ENST00000522243 CCNIQ14094 377 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 TRAM2Q15035 370 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 NKPD1Q17RQ9 610 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 IFI44LQ53G44 452 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 PABPC1L2AQ5JQF8 200 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 SLC25A47Q6Q0C1 308 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 FKBP9P1Q75LS8 142 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 PHC2Q8IXK0 858 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 OFCC1Q8IZS5 231 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 LRRC75AQ8NAA5 344 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 OR1J2Q8NGS2 313 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 YIPF5Q969M3 257 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 NABP1Q96AH0 204 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 C1orf198Q9H425 327 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 NARFLQ9H6Q4 476 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 SIAEQ9HAT2 523 aa17.74■□□□□ 0.43
SDCBP-209ENST00000522243 SERPINA1P01009 418 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 NCK1P16333 377 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 SRD5A1P18405 259 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 APLNRP35414 380 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 MAGEB1P43366 347 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 GSK3BP49841 420 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 UCP2P55851 309 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 RPL27P61353 136 aaKnown RBP17.73■□□□□ 0.43
SDCBP-209ENST00000522243 PRKCDQ05655 676 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 TBPL2Q6SJ96 375 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 CBLL1Q75N03 491 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 OR13C2Q8NGS9 318 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 SYNPRQ8TBG9 265 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 RDH5Q92781 318 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 HSH2DQ96JZ2 352 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 HOPXQ9BPY8 73 aaPredicted RBP17.73■□□□□ 0.43
SDCBP-209ENST00000522243 LRMDAQ9H2I8 198 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 EFCAB1Q9HAE3 211 aa17.73■□□□□ 0.43
SDCBP-209ENST00000522243 NPIPB13A6NJU9 1138 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 EFCAB9A8MZ26 197 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 NPIPB4C9JG80 1138 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 MGRN1O60291 552 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 SNAP29O95721 258 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 RAD52P43351 418 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 GPR6P46095 362 aaPredicted RBP17.72■□□□□ 0.43
SDCBP-209ENST00000522243 NUDT2P50583 147 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 SELENOVP59797 346 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 ERVK-25P63136 954 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 GLO1Q04760 184 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 TAF11Q15544 211 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 CR1LQ2VPA4 569 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 C8orf82Q6P1X6 216 aaPredicted RBP17.72■□□□□ 0.43
SDCBP-209ENST00000522243 ZNF730Q6ZMV8 503 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 OR1J1Q8NGS3 322 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 AKR7LQ8NHP1 331 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 GEMIN6Q8WXD5 167 aaKnown RBP17.72■□□□□ 0.43
SDCBP-209ENST00000522243 C11orf40Q8WZ69 217 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 FAM162AQ96A26 154 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 RBP7Q96R05 134 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 ALG12Q9BV10 488 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 SMURF2Q9HAU4 748 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 MED4Q9NPJ6 270 aa17.72■□□□□ 0.43
SDCBP-209ENST00000522243 A0A087WUU8 490 aa17.71■□□□□ 0.43
SDCBP-209ENST00000522243 IGHMP01871 453 aa17.71■□□□□ 0.43
SDCBP-209ENST00000522243 ZNF250P15622 560 aa17.71■□□□□ 0.43
SDCBP-209ENST00000522243 STOMP27105 288 aa17.71■□□□□ 0.43
SDCBP-209ENST00000522243 GPR4P46093 362 aa17.71■□□□□ 0.43
SDCBP-209ENST00000522243 KLF3P57682 345 aaPredicted RBP17.71■□□□□ 0.43
SDCBP-209ENST00000522243 SRSF2Q01130 221 aaKnown RBP17.71■□□□□ 0.43
SDCBP-209ENST00000522243 FHL1Q13642 323 aa17.71■□□□□ 0.43
SDCBP-209ENST00000522243 OAFQ86UD1 273 aa17.71■□□□□ 0.43
SDCBP-209ENST00000522243 LINC01356Q8N9X3 169 aa17.71■□□□□ 0.43
SDCBP-209ENST00000522243 ZNF519Q8TB69 540 aa17.71■□□□□ 0.43
SDCBP-209ENST00000522243 TMEM158Q8WZ71 300 aa17.71■□□□□ 0.43
SDCBP-209ENST00000522243 GTF3AQ92664 365 aaKnown RBP17.71■□□□□ 0.43
SDCBP-209ENST00000522243 HPS1Q92902 700 aa17.71■□□□□ 0.43
SDCBP-209ENST00000522243 BCL2L14Q9BZR8 327 aa17.71■□□□□ 0.43
SDCBP-209ENST00000522243 ZNF275Q9NSD4 429 aaPredicted RBP17.71■□□□□ 0.43
SDCBP-209ENST00000522243 FBN1P35555 2871 aaKnown RBP17.71■□□□□ 0.43
SDCBP-209ENST00000522243 IGLV3-9A0A075B6K5 115 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 A0A1W2PPL8 197 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 HTR3EA5X5Y0 456 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 C17orf100A8MU93 164 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 H7C1C5 153 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 WNT9BO14905 357 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 CDC14BO60729 498 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 PRSS23O95084 383 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 NR2C1P13056 603 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 HNF1AP20823 631 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms