RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	SCN2A	Q99250	2005 aa		6.07	□□□□□ -1.44
SDCBP-208	ENST00000520228	PTPN13	Q12923	2485 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	COL12A1	Q99715	3063 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	C17orf51	A8MQB3	221 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	RFXANK	O14593	260 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	ATP8B1	O43520	1251 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	XPNPEP2	O43895	674 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	EDF1	O60869	148 aa	Known RBP	6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	OXSR1	O95747	527 aa	Predicted RBP	6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	ANGPTL1	O95841	491 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	ACTL6A	O96019	429 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	HOXD4	P09016	255 aa	Predicted RBP	6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	DPP4	P27487	766 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	SRD5A2	P31213	254 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	HOXA1	P49639	335 aa	Predicted RBP	6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	CASP9	P55211	416 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	DSCR4	P56555	118 aa	Predicted RBP	6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	IRX1	P78414	480 aa	Predicted RBP	6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	C17orf67	Q0P5P2	114 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	DCST2	Q5T1A1	773 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	GCNT6	Q5T4J0	391 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	ATAD3B	Q5T9A4	648 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	TMEM211	Q6ICI0	200 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	TEX38	Q6PEX7	206 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	XKRX	Q6PP77	449 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	APOOL	Q6UXV4	268 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	C16orf62	Q7Z3J2	963 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	PTOV1	Q86YD1	416 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	OR2M3	Q8NG83	312 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	OR5D16	Q8NGK9	328 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	OR9I1	Q8NGQ6	314 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	OR13A1	Q8NGR1	328 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	GOT1L1	Q8NHS2	421 aa	Predicted RBP	6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	MIPOL1	Q8TD10	442 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	PHF10	Q8WUB8	498 aa	Known RBP	6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	ITLN2	Q8WWU7	325 aa	Predicted RBP	6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	VPS33A	Q96AX1	596 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	NEURL3	Q96EH8	262 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	ITCH	Q96J02	903 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	SLC35G5	Q96KT7	338 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	C17orf77	Q96MU5	243 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	SIKE1	Q9BRV8	207 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	SLC35A5	Q9BS91	424 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	INPP5K	Q9BT40	448 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	CENPO	Q9BU64	300 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	HOXD1	Q9GZZ0	328 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	DSN1	Q9H410	356 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	PTGES2	Q9H7Z7	377 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	RMND5A	Q9H871	391 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	EXD2	Q9NVH0	621 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	NKIRAS2	Q9NYR9	191 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	MED11	Q9P086	117 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	DKKL1	Q9UK85	242 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	MRPS18C	Q9Y3D5	142 aa	Known RBP	6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	MAGED1	Q9Y5V3	778 aa	Predicted RBP	6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	UNC79	Q9P2D8	2635 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	UTP20	O75691	2785 aa	Known RBP	6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	SHANK1	Q9Y566	2161 aa		6.06	□□□□□ -1.44
SDCBP-208	ENST00000520228	CPAMD8	Q8IZJ3	1885 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	IGLV5-45	A0A087WSX0	123 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	IGLV3-32	A0A0A0MS00	114 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228		A0A0G2JND7	137 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	IFITM10	A6NMD0	228 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228		H3BNH8	94 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	GMFG	O60234	142 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	STX11	O75558	287 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	ANP32D	O95626	131 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	KRT75	O95678	551 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	CLDN1	O95832	211 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	AK1	P00568	194 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	LIPF	P07098	398 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	VIM	P08670	466 aa	Known RBP	6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	OR12D1	P0DN82	309 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	TROVE2	P10155	538 aa	Known RBP eCLIP	6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	GP1BB	P13224	206 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	GABRA1	P14867	456 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	NCF2	P19878	526 aa	Predicted RBP	6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	TCEA1	P23193	301 aa	Known RBP	6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	PTGER4	P35408	488 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	DCT	P40126	519 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	CDKN2C	P42773	168 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	MRPL19	P49406	292 aa	Known RBP	6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	KHK	P50053	298 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	ATP4B	P51164	291 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	ATP12A	P54707	1039 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	ARHGAP11B	Q3KRB8	267 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	KLHL26	Q53HC5	615 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	NHSL2	Q5HYW2	709 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	PDSS1	Q5T2R2	415 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	C1orf185	Q5T7R7	199 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	SAXO2	Q658L1	398 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	MSANTD1	Q6ZTZ1	278 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	IFNE	Q86WN2	208 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	RNF130	Q86XS8	419 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	MISP	Q8IVT2	679 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	LSMEM1	Q8N8F7	131 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	FADS6	Q8N9I5	356 aa		6.05	□□□□□ -1.44
SDCBP-208	ENST00000520228	GATS	Q8NAP1	163 aa		6.05	□□□□□ -1.44

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