RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 SERPINA3P01011 423 aa3.34□□□□□ -1.87
PTPN12-213ENST00000519553 HNRNPH3P31942 346 aaKnown RBP3.34□□□□□ -1.87
PTPN12-213ENST00000519553 CDKN2BP42772 138 aa3.34□□□□□ -1.87
PTPN12-213ENST00000519553 ZNF138P52744 262 aa3.34□□□□□ -1.87
PTPN12-213ENST00000519553 MRPS22P82650 360 aaKnown RBP3.34□□□□□ -1.87
PTPN12-213ENST00000519553 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
PTPN12-213ENST00000519553 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
PTPN12-213ENST00000519553 CEMP1Q6PRD7 247 aaPredicted RBP3.34□□□□□ -1.87
PTPN12-213ENST00000519553 TEX43Q6ZNM6 134 aa3.34□□□□□ -1.87
PTPN12-213ENST00000519553 NTM-AS1Q6ZSK4 140 aa3.34□□□□□ -1.87
PTPN12-213ENST00000519553 HDDC2Q7Z4H3 204 aa3.34□□□□□ -1.87
PTPN12-213ENST00000519553 ZNF615Q8N8J6 731 aa3.34□□□□□ -1.87
PTPN12-213ENST00000519553 NOXO1Q8NFA2 376 aa3.34□□□□□ -1.87
PTPN12-213ENST00000519553 OR13C2Q8NGS9 318 aa3.34□□□□□ -1.87
PTPN12-213ENST00000519553 PIBF1Q8WXW3 757 aa3.34□□□□□ -1.87
PTPN12-213ENST00000519553 CREB3L1Q96BA8 519 aa3.34□□□□□ -1.87
PTPN12-213ENST00000519553 RTBDNQ9BSG5 229 aaPredicted RBP3.34□□□□□ -1.87
PTPN12-213ENST00000519553 ZNF355PQ9NSJ1 428 aa3.34□□□□□ -1.87
PTPN12-213ENST00000519553 CST1P01037 141 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 BCHEP06276 602 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 ZNF43P17038 809 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 CASP14P31944 242 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 MAS1LP35410 378 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 NAMPTP43490 491 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 GINS1Q14691 196 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 DNAJC24Q6P3W2 148 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 KDELC1Q6UW63 502 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 ZNF836Q6ZNA1 936 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 NIPA1Q7RTP0 329 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 WDR86Q86TI4 376 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 NBPF5PQ86XG9 351 aaPredicted RBP3.33□□□□□ -1.88
PTPN12-213ENST00000519553 RIMKLAQ8IXN7 391 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 PDIK1LQ8N165 341 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 RHEBL1Q8TAI7 183 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 ZNF578Q96N58 590 aaPredicted RBP3.33□□□□□ -1.88
PTPN12-213ENST00000519553 KLHL28Q9NXS3 571 aa3.33□□□□□ -1.88
PTPN12-213ENST00000519553 CABIN1Q9Y6J0 2220 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 DYNC1I1O14576 645 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 PPP1R2P9O14990 202 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 MRPS12O15235 138 aaKnown RBP3.32□□□□□ -1.88
PTPN12-213ENST00000519553 FOXH1O75593 365 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 SRP72O76094 671 aaKnown RBP3.32□□□□□ -1.88
PTPN12-213ENST00000519553 RAB3DO95716 219 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 CALM1P0DP23 149 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 CALM2P0DP24 149 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 CALM3P0DP25 149 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 MCF2P10911 925 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 PTMSP20962 102 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 AQP2P41181 271 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 CSNK1A1P48729 337 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 ACTG2P63267 376 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 MAB21L1Q13394 359 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 CLINT1Q14677 625 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 TGFBIQ15582 683 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 ZSCAN26Q16670 478 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 PRAMEF5Q5TYX0 476 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 PRAMEF6Q5VXH4 476 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 ANKRD22Q5VYY1 191 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 IGFL1Q6UW32 110 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 OAFQ86UD1 273 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 UBALD2Q8IYN6 164 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 EID2Q8N6I1 236 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 SYNPRQ8TBG9 265 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 CTRCQ99895 268 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 METTL7AQ9H8H3 244 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 PISDQ9UG56 409 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 LSM7Q9UK45 103 aaKnown RBP3.32□□□□□ -1.88
PTPN12-213ENST00000519553 ING4Q9UNL4 249 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 GAKO14976 1311 aa3.32□□□□□ -1.88
PTPN12-213ENST00000519553 KIF26AQ9ULI4 1882 aaPredicted RBP3.32□□□□□ -1.88
PTPN12-213ENST00000519553 EEDO75530 441 aaKnown RBP3.31□□□□□ -1.88
PTPN12-213ENST00000519553 ADRA2AP08913 450 aa3.31□□□□□ -1.88
PTPN12-213ENST00000519553 NCF2P19878 526 aaPredicted RBP3.31□□□□□ -1.88
PTPN12-213ENST00000519553 SSR4P51571 173 aa3.31□□□□□ -1.88
PTPN12-213ENST00000519553 YWHAGP61981 247 aaKnown RBP eCLIP3.31□□□□□ -1.88
PTPN12-213ENST00000519553 DDX39BQ13838 428 aaKnown RBP3.31□□□□□ -1.88
PTPN12-213ENST00000519553 PON2Q15165 354 aa3.31□□□□□ -1.88
PTPN12-213ENST00000519553 MMAAQ8IVH4 418 aaKnown RBP3.31□□□□□ -1.88
PTPN12-213ENST00000519553 UBE2J2Q8N2K1 259 aa3.31□□□□□ -1.88
PTPN12-213ENST00000519553 RNF182Q8N6D2 247 aa3.31□□□□□ -1.88
PTPN12-213ENST00000519553 B3GNT7Q8NFL0 401 aa3.31□□□□□ -1.88
PTPN12-213ENST00000519553 ZNF721Q8TF20 911 aa3.31□□□□□ -1.88
PTPN12-213ENST00000519553 ZNF606Q8WXB4 792 aa3.31□□□□□ -1.88
PTPN12-213ENST00000519553 ESR2Q92731 530 aa3.31□□□□□ -1.88
PTPN12-213ENST00000519553 TM4SF18Q96CE8 201 aa3.31□□□□□ -1.88
PTPN12-213ENST00000519553 ZNF681Q96N22 645 aa3.31□□□□□ -1.88
PTPN12-213ENST00000519553 UBE2ZQ9H832 354 aaPredicted RBP3.31□□□□□ -1.88
PTPN12-213ENST00000519553 ZNRD1Q9P1U0 126 aa3.31□□□□□ -1.88
PTPN12-213ENST00000519553 CSDC2Q9Y534 153 aaKnown RBP3.31□□□□□ -1.88
PTPN12-213ENST00000519553 ZNF207O43670 478 aaKnown RBP3.3□□□□□ -1.88
PTPN12-213ENST00000519553 CLPXO76031 633 aa3.3□□□□□ -1.88
PTPN12-213ENST00000519553 HLA-DPB1P04440 258 aa3.3□□□□□ -1.88
PTPN12-213ENST00000519553 SLC2A3P11169 496 aa3.3□□□□□ -1.88
PTPN12-213ENST00000519553 MXD1Q05195 221 aa3.3□□□□□ -1.88
PTPN12-213ENST00000519553 LOXL1Q08397 574 aaPredicted RBP3.3□□□□□ -1.88
PTPN12-213ENST00000519553 CEP55Q53EZ4 464 aa3.3□□□□□ -1.88
PTPN12-213ENST00000519553 FBXW9Q5XUX1 488 aa3.3□□□□□ -1.88
PTPN12-213ENST00000519553 ANKRD26P1Q6NSI1 321 aa3.3□□□□□ -1.88
PTPN12-213ENST00000519553 OR10J6PQ8NGY7 276 aa3.3□□□□□ -1.88
PTPN12-213ENST00000519553 CXorf40AQ8TE69 158 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms