RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 ZNF716A6NP11 495 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 H0YC42 278 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 RRP8O43159 456 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 GPRIN2O60269 458 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 SLC43A1O75387 559 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 SLC34A2O95436 690 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 SERPINA3P01011 423 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 SPARCP09486 303 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 ZNF24P17028 368 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 KLK2P20151 261 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 GUCA1AP43080 201 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 SIRPAP78324 504 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 CDK5R1Q15078 307 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 ETFDHQ16134 617 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 PCK2Q16822 640 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 DMKNQ6E0U4 476 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 SPACA3Q8IXA5 215 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 RFLNBQ8N5W9 214 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 ZFP41Q8N8Y5 198 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 THEM6Q8WUY1 208 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 MCHR2Q969V1 340 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 TMEM45BQ96B21 275 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 OR2M2Q96R28 347 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 KCNN2Q9H2S1 579 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 CCDC86Q9H6F5 360 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 B3GAT2Q9NPZ5 323 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 TXNL4BQ9NX01 149 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 GLTPQ9NZD2 209 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 CCDC59Q9P031 241 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 EMC3Q9P0I2 261 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 FLVCR1Q9Y5Y0 555 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 ALPK2Q86TB3 2170 aa13.39□□□□□ -0.27
TRAPPC9-205ENST00000518839 IGKV3D-15A0A087WSY6 115 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 PNMA8CA0A1B0GUJ8 204 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 MKRN2OSH3BPM6 223 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 RGS9O75916 674 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 ZNF432O94892 652 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 IGHG3P01860 377 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 QDPRP09417 244 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 CPN1P15169 458 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 SOX6P35712 828 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 RASGEF1BQ0VAM2 473 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 EIF2B1Q14232 305 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 ZNF169Q14929 603 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 KCNMB1Q16558 191 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 C10orf128Q5T292 105 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 CARD17Q5XLA6 110 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 ZNF544Q6NX49 715 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 ARL9Q6T311 187 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 WDFY1Q8IWB7 410 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 TMEM123Q8N131 208 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 YIPF7Q8N8F6 280 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 ZIC4Q8N9L1 334 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 ROBO4Q8WZ75 1007 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 NSMAFQ92636 917 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 SMIM19Q96E16 107 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 KCTD7Q96MP8 289 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 ZNF385AQ96PM9 386 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 OR8B4Q96RC9 309 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 DEFB127Q9H1M4 99 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 RNF122Q9H9V4 155 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 ST6GALNAC2Q9UJ37 374 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 IKZF2Q9UKS7 526 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 CSAG2Q9Y5P2 127 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 A3GALT2U3KPV4 340 aa13.38□□□□□ -0.27
TRAPPC9-205ENST00000518839 A0A1W2PPL8 197 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 ZNF254O75437 659 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 CLPXO76031 633 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 GPANK1O95872 356 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 EDNRAP25101 427 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 EIF2S3P41091 472 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 GDI2P50395 445 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 ZNF84P51523 738 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 UCNP55089 124 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 ROM1Q03395 351 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 SRYQ05066 204 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 RNPS1Q15287 305 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 INAQ16352 499 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 DEGS2Q6QHC5 323 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 PAMR1Q6UXH9 720 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 AAED1Q7RTV5 226 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 C20orf196Q8IYI0 205 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 ZNF679Q8IYX0 411 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 OR52N5Q8NH56 324 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 RPS4Y2Q8TD47 263 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 RNF128Q8TEB7 428 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 C11orf40Q8WZ69 217 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 TMEM203Q969S6 136 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 ZNF845Q96IR2 970 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 TMED9Q9BVK6 235 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 CDADC1Q9BWV3 514 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 MROQ9BYG7 248 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 TTTY10Q9BZA0 68 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 PRRG4Q9BZD6 226 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 ACOXLQ9NUZ1 547 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 MRM2Q9UI43 246 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 FOXD3Q9UJU5 478 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 KLHDC2Q9Y2U9 406 aa13.37□□□□□ -0.27
TRAPPC9-205ENST00000518839 ARPC4-TTLL3A0A0A6YYG9 625 aa13.36□□□□□ -0.27
TRAPPC9-205ENST00000518839 IGKV1D-43A0A0B4J1Z2 117 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms