RNA–Protein interactions for RNA: ENST00000513405.1

AP001999.1-201, humanhuman

TSL 2 BASIC

Gene AP001999.1, Length 3,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.1-201ENST00000513405 CHRNA9Q9UGM1 479 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 SERTAD3Q9UJW9 196 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 ROS1P08922 2347 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 A0A1W2PNR3 127 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 F5H5P2 479 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 FOXS1O43638 330 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 GPRIN2O60269 458 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 PNMTP11086 282 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 ENPP1P22413 925 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 CD38P28907 300 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 THBS2P35442 1172 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 SNU13P55769 128 aaKnown RBP12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 S100A10P60903 97 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 SLC22A6Q4U2R8 563 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 WDR38Q5JTN6 314 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 OR52W1Q6IF63 320 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 RTL10Q7L3V2 364 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 BPIFB2Q8N4F0 458 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 OR14A16Q8NHC5 309 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 SLC2A12Q8TD20 617 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 BANF2Q9H503 90 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 TMED7-TICAM2A0A0A6YYA0 188 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 SPTY2D1-AS1A0A0U1RR47 76 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 A0A1B0GW55 424 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 CCDC85CA6NKD9 419 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 F5H5K5 113 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 KLF4O43474 513 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 DUX4L2P0CJ85 424 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 DUX4L3P0CJ86 424 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 DUX4L4P0CJ87 422 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 DUX4L5P0CJ88 424 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 DUX4L6P0CJ89 424 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 DUX4L7P0CJ90 424 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 HLA-DOBP13765 273 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 IFNGR1P15260 489 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 DHPSP49366 369 aaPredicted RBP12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 ZNF74Q16587 644 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 RNASE10Q5GAN6 216 aaKnown RBP12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 NKAPLQ5M9Q1 402 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 KIAA0895LQ68EN5 471 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 DAZLQ92904 295 aaKnown RBP12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 ZDHHC12Q96GR4 267 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 LCORQ96JN0 433 aaPredicted RBP12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 NUDT9Q9BW91 350 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 MMP25Q9NPA2 562 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 ANKRD10Q9NXR5 420 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 CTSFQ9UBX1 484 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 DUX4Q9UBX2 424 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 TMED7Q9Y3B3 224 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 PCDHGA5Q9Y5G8 931 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 TMEM14AQ9Y6G1 99 aa12.39□□□□□ -0.43
AP001999.1-201ENST00000513405 FRMPD3Q5JV73 1810 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 EFCAB7A8K855 629 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 DISC1C4P0D8 188 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 GABARAPH6UMI1 98 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 ZNF432O94892 652 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 ACHEP22303 614 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 SDHAP31040 664 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 MMP15P51511 669 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 STK11Q15831 433 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 SLC16A9Q7RTY1 509 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 ZNF485Q8NCK3 441 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 TSNAXQ99598 290 aaKnown RBP12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 GHITMQ9H3K2 345 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 EMC7Q9NPA0 242 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 RIF1Q5UIP0 2472 aaKnown RBP12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 LEUTXA8MZ59 168 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 ZNF736B4DX44 427 aaPredicted RBP12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 ZNF749O43361 778 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 HLA-AP01891 365 aaKnown RBP12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 PRTGQ2VWP7 1150 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 STEAP1BQ6NZ63 245 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 ZNF546Q86UE3 836 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 ZFP82Q8N141 532 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 ZNF283Q8N7M2 679 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 ST6GALNAC5Q9BVH7 336 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 PARP12Q9H0J9 701 aaKnown RBP12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 CHMP1AQ9HD42 196 aaPredicted RBP12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 FGF21Q9NSA1 209 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 PRR13Q9NZ81 148 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 SUSD2Q9UGT4 822 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 POMT2Q9UKY4 750 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 PHF3Q92576 2039 aaKnown RBP12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 SCGB1D2O95969 90 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 KNG1P01042 644 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 HEXBP07686 556 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 SFTPBP07988 381 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 LIMK1P53667 647 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 YPEL5P62699 121 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 SLC9A3R2Q15599 337 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 RSPO4Q2I0M5 234 aaPredicted RBP12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 EEF1A1P5Q5VTE0 462 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 RNLSQ5VYX0 342 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 PWWP2BQ6NUJ5 590 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 C3orf33Q6P1S2 294 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 TMEM185AQ8NFB2 350 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 TSPAN32Q96QS1 320 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 OR5B2Q96R09 309 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 GSX2Q9BZM3 304 aa12.38□□□□□ -0.43
AP001999.1-201ENST00000513405 ZNF304Q9HCX3 659 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms