RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 FBXL3Q9UKT7 428 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 CORO2BQ9UQ03 480 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 POFUT2Q9Y2G5 429 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 NPTNQ9Y639 398 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 PLXNB1O43157 2135 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 ZSCAN5BA6NJL1 495 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 ZNF726A6NNF4 738 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 C3orf80F5H4A9 247 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 H0YL77 283 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 POLR3GO15318 223 aaPredicted RBP9.38□□□□□ -0.91
RNF4-218ENST00000513284 SERPINB7O75635 380 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 UBL3O95164 117 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 CRYBA1P05813 215 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 LCKP06239 509 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 CBLP22681 906 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 GRPRP30550 384 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 SELENOVP59797 346 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 MAGOHP61326 146 aaKnown RBP9.38□□□□□ -0.91
RNF4-218ENST00000513284 RBBP4Q09028 425 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 CAMK2DQ13557 499 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 FAM189A2Q15884 450 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 GTDC1Q4AE62 458 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 FAM209AQ5JX71 171 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 GCNT6Q5T4J0 391 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 ULK3Q6PHR2 472 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 BRD3OSQ6XYD6 125 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 SCAIQ8N9R8 606 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 SLC30A7Q8NEW0 376 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 OR10S1Q8NGN2 331 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 SNX33Q8WV41 574 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 ZNF607Q96SK3 696 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 FOXB1Q99853 325 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 TCF7L2Q9NQB0 619 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 ASH2LQ9UBL3 628 aa9.38□□□□□ -0.91
RNF4-218ENST00000513284 TANC2Q9HCD6 1990 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 EPPK1P58107 5090 aaKnown RBP9.37□□□□□ -0.91
RNF4-218ENST00000513284 DOCK11Q5JSL3 2073 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 IGKV1D-42A0A075B6H8 117 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 A0A1B0GWA3 101 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 EVPLLA8MZ36 301 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 ERLIN1O75477 346 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 MFN2O95140 757 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 ADH4P08319 380 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 WNT2P09544 360 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 SLC6A2P23975 617 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 MPV17P39210 176 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 RGS8P57771 180 aaPredicted RBP9.37□□□□□ -0.91
RNF4-218ENST00000513284 HOXC5Q00444 222 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 CDK6Q00534 326 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 REEP3Q6NUK4 255 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 LRFN4Q6PJG9 635 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 DHRS4L2Q6PKH6 230 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 RANBP3LQ86VV4 465 aaPredicted RBP9.37□□□□□ -0.91
RNF4-218ENST00000513284 OR6N1Q8NGY5 312 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 GEMIN6Q8WXD5 167 aaKnown RBP9.37□□□□□ -0.91
RNF4-218ENST00000513284 GTF2H4Q92759 462 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 VPS33AQ96AX1 596 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 DIRC2Q96SL1 478 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 SH3GL3Q99963 347 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 ULBP2Q9BZM5 246 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 TCF7L1Q9HCS4 588 aa9.37□□□□□ -0.91
RNF4-218ENST00000513284 A0A087WUJ7 227 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 TRAV40A0A0B4J280 105 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 LOC100653049A0A140TA62 436 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 C5orf63A6NC05 138 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 KRT34O76011 436 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 OR6A2O95222 327 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 SNAP29O95721 258 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 MELTFP08582 738 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 THRBP10828 461 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 MRPL19P49406 292 aaKnown RBP9.36□□□□□ -0.91
RNF4-218ENST00000513284 LOXL3P58215 753 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 SLC3A1Q07837 685 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 PUDPQ08623 228 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 PMS2P3Q13401 168 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 ZMYND11Q15326 602 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 TMEM155Q4W5P6 130 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 THEM4Q5T1C6 240 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 SWT1Q5T5J6 900 aaKnown RBP9.36□□□□□ -0.91
RNF4-218ENST00000513284 ZNF774Q6NX45 483 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 SLC2A7Q6PXP3 512 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 PIWIL3Q7Z3Z3 882 aaKnown RBP9.36□□□□□ -0.91
RNF4-218ENST00000513284 MAVSQ7Z434 540 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 SLC22A24Q8N4F4 322 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 C10orf53Q8N6V4 93 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 OR9I1Q8NGQ6 314 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 NFKBIDQ8NI38 313 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 MRAPQ8TCY5 172 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 MAL2Q969L2 176 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 ZDHHC16Q969W1 377 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 MARS2Q96GW9 593 aaKnown RBP9.36□□□□□ -0.91
RNF4-218ENST00000513284 SLC41A3Q96GZ6 507 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 SIGLEC11Q96RL6 698 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 PAIP1Q9H074 479 aaKnown RBP9.36□□□□□ -0.91
RNF4-218ENST00000513284 ANGPT4Q9Y264 503 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 USH1CQ9Y6N9 552 aa9.36□□□□□ -0.91
RNF4-218ENST00000513284 FARS2O95363 451 aaKnown RBP9.35□□□□□ -0.91
RNF4-218ENST00000513284 TGDSO95455 350 aa9.35□□□□□ -0.91
RNF4-218ENST00000513284 MT-ATP6P00846 226 aa9.35□□□□□ -0.91
RNF4-218ENST00000513284 MT-ND5P03915 603 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms