RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 RHNO1Q9BSD3 238 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 FUZQ9BT04 418 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 MRPL37Q9BZE1 423 aaKnown RBP14.22□□□□□ -0.13
DDX41-213ENST00000512027 STX18Q9P2W9 335 aaKnown RBP14.22□□□□□ -0.13
DDX41-213ENST00000512027 RTTNQ86VV8 2226 aa14.22□□□□□ -0.13
DDX41-213ENST00000512027 YLPM1P49750 1951 aaKnown RBP14.22□□□□□ -0.13
DDX41-213ENST00000512027 SONP18583 2426 aaKnown RBP14.21□□□□□ -0.13
DDX41-213ENST00000512027 A0A096LNT2 108 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 A0A1W2PPL8 197 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 INAFM1C9JVW0 142 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 F12P00748 615 aaPredicted RBP14.21□□□□□ -0.13
DDX41-213ENST00000512027 FAM157BP0CG42 384 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 MRPS34P82930 218 aaKnown RBP14.21□□□□□ -0.13
DDX41-213ENST00000512027 TAF11Q15544 211 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 CARTPTQ16568 116 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 SLC36A2Q495M3 483 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 OTPQ5XKR4 325 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 TMEM53Q6P2H8 277 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 ARIH2OSQ8N7S6 290 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 SLC30A7Q8NEW0 376 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 FAM168AQ92567 244 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 NSL1Q96IY1 281 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 DOK1Q99704 481 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 SYT3Q9BQG1 590 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 ALG12Q9BV10 488 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 TPK1Q9H3S4 243 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 DENND2DQ9H6A0 471 aaPredicted RBP14.21□□□□□ -0.13
DDX41-213ENST00000512027 MYEF2Q9P2K5 600 aaKnown RBP14.21□□□□□ -0.13
DDX41-213ENST00000512027 SIGLEC7Q9Y286 467 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 TMEM5Q9Y2B1 443 aa14.21□□□□□ -0.13
DDX41-213ENST00000512027 HIVEP2P31629 2446 aa14.21□□□□□ -0.14
DDX41-213ENST00000512027 ABCA1O95477 2261 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 TEX13CA0A0J9YWL9 993 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 MGRN1O60291 552 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 PTP4A3O75365 173 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 GADD45GO95257 159 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 SCG5P05408 212 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 FABP3P05413 133 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 T-ENOLP0DO92 83 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 ZNF32P17041 273 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 APEX1P27695 318 aaKnown RBP14.2□□□□□ -0.14
DDX41-213ENST00000512027 PPOXP50336 477 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 ERVS71-1P61550 626 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 GALK2Q01415 458 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 DBPQ10586 325 aaPredicted RBP14.2□□□□□ -0.14
DDX41-213ENST00000512027 MAD2L1BPQ15013 274 aaPredicted RBP14.2□□□□□ -0.14
DDX41-213ENST00000512027 ANKDD1AQ495B1 522 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 PABPC1L2AQ5JQF8 200 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 FAM122BQ7Z309 247 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 CPEB3Q8NE35 698 aaKnown RBP14.2□□□□□ -0.14
DDX41-213ENST00000512027 AKR7LQ8NHP1 331 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 C10orf105Q8TEF2 133 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 MRPL24Q96A35 216 aaKnown RBP14.2□□□□□ -0.14
DDX41-213ENST00000512027 ZNF570Q96NI8 536 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 RBP7Q96R05 134 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 SIAEQ9HAT2 523 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 SMURF2Q9HAU4 748 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 DYNLRB1Q9NP97 96 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 NDE1Q9NXR1 346 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 GRHPRQ9UBQ7 328 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 AURKCQ9UQB9 309 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 CMAHPQ9Y471 501 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 ABCA2Q9BZC7 2435 aa14.2□□□□□ -0.14
DDX41-213ENST00000512027 UNC119BA6NIH7 251 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 A6NIZ1 184 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 ENTPD5O75356 428 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 NDUFB2O95178 105 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 CD14P08571 375 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 LAP3P28838 519 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 RRM2P31350 389 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 RAP1BP61224 184 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 RAP1AP62834 184 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 NRN1LQ496H8 165 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 THEM4Q5T1C6 240 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 FAM205BPQ63HN1 556 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 ZDHHC21Q8IVQ6 265 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 MCUR1Q96AQ8 359 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 CDH20Q9HBT6 801 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 EMC7Q9NPA0 242 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 CCNB1IP1Q9NPC3 277 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 FAM53CQ9NYF3 392 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 SLC7A8Q9UHI5 535 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 FBXL3Q9UKT7 428 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 SPEF1Q9Y4P9 236 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 FKBP7Q9Y680 259 aa14.19□□□□□ -0.14
DDX41-213ENST00000512027 SLC22A23A1A5C7 686 aa14.18□□□□□ -0.14
DDX41-213ENST00000512027 SOCS2O14508 198 aa14.18□□□□□ -0.14
DDX41-213ENST00000512027 ADRA2AP08913 450 aa14.18□□□□□ -0.14
DDX41-213ENST00000512027 NR2C1P13056 603 aa14.18□□□□□ -0.14
DDX41-213ENST00000512027 ITGA2P17301 1181 aa14.18□□□□□ -0.14
DDX41-213ENST00000512027 GLRXP35754 106 aa14.18□□□□□ -0.14
DDX41-213ENST00000512027 ALDH3B1P43353 468 aa14.18□□□□□ -0.14
DDX41-213ENST00000512027 HSF2Q03933 536 aa14.18□□□□□ -0.14
DDX41-213ENST00000512027 KRR1Q13601 381 aaKnown RBP14.18□□□□□ -0.14
DDX41-213ENST00000512027 ALKBH6Q3KRA9 238 aa14.18□□□□□ -0.14
DDX41-213ENST00000512027 UGT2A3Q6UWM9 527 aa14.18□□□□□ -0.14
DDX41-213ENST00000512027 ZER1Q7Z7L7 766 aa14.18□□□□□ -0.14
DDX41-213ENST00000512027 ICA1LQ8NDH6 482 aa14.18□□□□□ -0.14
DDX41-213ENST00000512027 CLPTM1LQ96KA5 538 aa14.18□□□□□ -0.14
DDX41-213ENST00000512027 ADAM21Q9UKJ8 722 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms