RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 DLK1P80370 383 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 SLC25A11Q02978 314 aaKnown RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 LPAL2Q16609 132 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 HIST2H2ACQ16777 129 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 CARD16Q5EG05 197 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 RBM48Q5RL73 367 aaKnown RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 AADACL2Q6P093 401 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 TMPRSS11AQ6ZMR5 421 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 PRSS45Q7RTY3 260 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 NOXA1Q86UR1 476 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 CADM2Q8N3J6 435 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 ATP6V1C2Q8NEY4 427 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR6K2Q8NGY2 324 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 MAGEE2Q8TD90 523 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 ISOC2Q96AB3 205 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 L3HYPDHQ96EM0 354 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 CXorf58Q96LI9 332 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 WDR77Q9BQA1 342 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 SLC2A11Q9BYW1 496 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 UCK2Q9BZX2 261 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 MMP28Q9H239 520 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 PPA2Q9H2U2 334 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 JKAMPQ9P055 326 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 PPP4R1LQ9P1A2 415 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 SEC14L4Q9UDX3 406 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF490Q9ULM2 529 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 COPS3Q9UNS2 423 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 WDR45Q9Y484 360 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 TCAF1Q9Y4C2 921 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 AP4S1Q9Y587 144 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 GPR179Q6PRD1 2367 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 EP300Q09472 2414 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 TRABD2BA6NFA1 517 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 ANKUB1A6NFN9 424 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 ENSAO43768 121 aaKnown RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 PRKYO43930 277 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 RAMP2O60895 175 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 CLDN11O75508 207 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 LATS1O95835 1130 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 WDPCPO95876 746 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 JUNP05412 331 aaKnown RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 HOXB2P14652 356 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 JUNBP17275 347 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 CD1CP29017 333 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 UQCRC1P31930 480 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 YAP1P46937 504 aaKnown RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 CXCL12P48061 93 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 ASCL1P50553 236 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 NXPH1P58417 271 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 ASAH1Q13510 395 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF234Q14588 700 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 MPPED2Q15777 294 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 GLYR1Q49A26 553 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZBED5Q49AG3 693 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 SOHLH1Q5JUK2 328 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 LAIR1Q6GTX8 287 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 PARGQ86W56 976 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF761Q86XN6 746 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 TMEFF1Q8IYR6 380 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 GALNT16Q8N428 558 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 RYBPQ8N488 228 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 DEFB119Q8N690 84 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF655Q8N720 491 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 NPWQ8N729 165 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 C8orf31Q8N9H6 132 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 SLC38A9Q8NBW4 561 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF738Q8NE65 137 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR9Q2Q8NGE9 314 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR51D1Q8NGF3 324 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 NR4A3Q92570 626 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 WDR34Q96EX3 536 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF347Q96SE7 839 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 DOK1Q99704 481 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 PITPNM3Q9BZ71 974 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 CUTCQ9NTM9 273 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 NPAP1Q9NZP6 1156 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 KIF25Q9UIL4 384 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 C14orf166Q9Y224 244 aaKnown RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 R4GN57 208 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 MIA3Q5JRA6 1907 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 COL4A2P08572 1712 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 RIF1Q5UIP0 2472 aaKnown RBP4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF292O60281 2723 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 A0A0G2JMP0 313 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 CENPXA8MT69 81 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 LOC110117498-PIK3R3F6TDL0 507 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 K7EN84 100 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 M0R3G1 203 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 BTN3A3O00478 584 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 DLEU1O43261 78 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 XPNPEP2O43895 674 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 HSBP1O75506 76 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 SCO1O75880 301 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 FARS2O95363 451 aaKnown RBP4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 GTF2F2P13984 249 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 IMPDH1P20839 514 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 SSTR1P30872 391 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 SSTR5P35346 364 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 GNA12Q03113 381 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms