RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 TFECO14948 347 aaPredicted RBP8.09□□□□□ -1.11
NR1I3-230ENST00000511944 SMAD9O15198 467 aaKnown RBP8.09□□□□□ -1.11
NR1I3-230ENST00000511944 KHDRBS3O75525 346 aaKnown RBP8.09□□□□□ -1.11
NR1I3-230ENST00000511944 SULT1C4O75897 302 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 AQP8O94778 261 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 CPEP16870 476 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 TGFBR2P37173 567 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 ID4P47928 161 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 BIDP55957 195 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 CLDN20P56880 219 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 EGR3Q06889 387 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 RNPS1Q15287 305 aaKnown RBP8.09□□□□□ -1.11
NR1I3-230ENST00000511944 SF3B4Q15427 424 aaKnown RBP eCLIP8.09□□□□□ -1.11
NR1I3-230ENST00000511944 MED22Q15528 200 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 KCNMB1Q16558 191 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 NRN1LQ496H8 165 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 CDONQ4KMG0 1287 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 ARMCX4Q5H9R4 360 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 C10orf128Q5T292 105 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 DEGS2Q6QHC5 323 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 ZNF322Q6U7Q0 402 aaPredicted RBP8.09□□□□□ -1.11
NR1I3-230ENST00000511944 PLEKHG7Q6ZR37 379 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 FOXL2NBQ6ZUU3 175 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 CREB3L2Q70SY1 520 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 TRILQ7L0X0 811 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.09□□□□□ -1.11
NR1I3-230ENST00000511944 CLVS1Q8IUQ0 354 aaPredicted RBP8.09□□□□□ -1.11
NR1I3-230ENST00000511944 SLC35F2Q8IXU6 374 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 OR6V1Q8N148 313 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 OR4F15Q8NGB8 312 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 OR5M1Q8NGP8 315 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 RNF128Q8TEB7 428 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 ABTB1Q969K4 478 aaPredicted RBP8.09□□□□□ -1.11
NR1I3-230ENST00000511944 TMIGD2Q96BF3 282 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 OPALINQ96PE5 141 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 INTS14Q96SY0 518 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 WACQ9BTA9 647 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 FUNDC2Q9BWH2 189 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 HES7Q9BYE0 225 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 PRDM14Q9GZV8 571 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 NUAK2Q9H093 628 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 TRIM36Q9NQ86 728 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 MCTS1Q9ULC4 181 aaKnown RBP8.09□□□□□ -1.11
NR1I3-230ENST00000511944 U3KQE9 123 aa8.09□□□□□ -1.11
NR1I3-230ENST00000511944 TMEM8BA6NDV4 472 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 ZNF726A6NNF4 738 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 ZNF716A6NP11 495 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 FAM166BA8MTA8 275 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 ZNF724A8MTY0 619 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 H3BMQ9 156 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 H3BSA7 217 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 CXCL13O43927 109 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 SLC16A7O60669 478 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 TMCC2O75069 709 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 ZNF432O94892 652 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 SYNGR4O95473 234 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 BPNT1O95861 308 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 F10P00742 488 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 PLGP00747 810 aaPredicted RBP8.08□□□□□ -1.12
NR1I3-230ENST00000511944 CRYABP02511 175 aaKnown RBP8.08□□□□□ -1.12
NR1I3-230ENST00000511944 TACSTD2P09758 323 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 FAM87AP0C7U9 286 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 CLUP10909 449 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 HLA-DOBP13765 273 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 CD36P16671 472 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 GABRA5P31644 462 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 CD97P48960 835 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 TGM4P49221 684 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 CLDN15P56746 228 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 CLRN1P58418 232 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 TUBA1BP68363 451 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 ROM1Q03395 351 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 MELKQ14680 651 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 ZNF684Q5T5D7 378 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 GPR107Q5VW38 600 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 CD200R1LQ6Q8B3 271 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 LINC00299Q6ZSB3 139 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 SLC16A12Q6ZSM3 486 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 TUBA1AQ71U36 451 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 FCRLAQ7L513 359 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 CDC20BQ86Y33 519 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 ERI1Q8IV48 349 aaKnown RBP8.08□□□□□ -1.12
NR1I3-230ENST00000511944 GLB1L2Q8IW92 636 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 TMEM123Q8N131 208 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 SLC26A10Q8NG04 563 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 OR10H4Q8NGA5 316 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 OR6K6Q8NGW6 343 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 OTOSQ8NHW6 89 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 ZPLD1Q8TCW7 415 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 RPS4Y2Q8TD47 263 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 THRSPQ92748 146 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 UFD1Q92890 307 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 TMEM54Q969K7 222 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 ZMYND19Q96E35 227 aaPredicted RBP8.08□□□□□ -1.12
NR1I3-230ENST00000511944 OR2M2Q96R28 347 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 OR5M11Q96RB7 305 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 TTYH2Q9BSA4 534 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 ALG8Q9BVK2 526 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 SRXN1Q9BYN0 137 aa8.08□□□□□ -1.12
NR1I3-230ENST00000511944 SLC6A15Q9H2J7 730 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms