RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 MRGPRGQ86SM5 289 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 FJX1Q86VR8 437 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 P2RY8Q86VZ1 359 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 TIGD4Q8IY51 512 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 PM20D2Q8IYS1 436 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 ATP6V1C2Q8NEY4 427 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 OR9K2Q8NGE7 335 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 OR10D3Q8NH80 312 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 ASB17Q8WXJ9 295 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 SMPDL3BQ92485 455 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 TMEM45BQ96B21 275 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 OTULINQ96BN8 352 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 NMD3Q96D46 503 aaKnown RBP8.1□□□□□ -1.11
NR1I3-228ENST00000511676 ZNF649Q9BS31 505 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 SYT4Q9H2B2 425 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 TMEM185BQ9H7F4 350 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 MED20Q9H944 212 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 WDR76Q9H967 626 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 PLSCR2Q9NRY7 297 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 ASB6Q9NWX5 421 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 NDUFB11Q9NX14 153 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 EMC3Q9P0I2 261 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 B9D1Q9UPM9 204 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 ZNF175Q9Y473 711 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 DOCK10Q96BY6 2186 aa8.1□□□□□ -1.11
NR1I3-228ENST00000511676 PRRC2CQ9Y520 2896 aaKnown RBP8.09□□□□□ -1.11
NR1I3-228ENST00000511676 TRGV5A0A0B4J1U4 118 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 OR14I1A6ND48 311 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 NPIPA2E9PIF3 369 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 ZNF670-ZNF695F2Z2N8 137 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 NPIPA3F8WFD2 350 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 AQP7O14520 342 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 EIF1AYO14602 144 aaKnown RBP8.09□□□□□ -1.11
NR1I3-228ENST00000511676 PRRG2O14669 202 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 TNFSF11O14788 317 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 TFECO14948 347 aaPredicted RBP8.09□□□□□ -1.11
NR1I3-228ENST00000511676 SMAD9O15198 467 aaKnown RBP8.09□□□□□ -1.11
NR1I3-228ENST00000511676 KHDRBS3O75525 346 aaKnown RBP8.09□□□□□ -1.11
NR1I3-228ENST00000511676 SULT1C4O75897 302 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 AQP8O94778 261 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 CPEP16870 476 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 TGFBR2P37173 567 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 BIDP55957 195 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 CLDN20P56880 219 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 EGR3Q06889 387 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 RNPS1Q15287 305 aaKnown RBP8.09□□□□□ -1.11
NR1I3-228ENST00000511676 SF3B4Q15427 424 aaKnown RBP eCLIP8.09□□□□□ -1.11
NR1I3-228ENST00000511676 MED22Q15528 200 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 KCNMB1Q16558 191 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 NRN1LQ496H8 165 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 CDONQ4KMG0 1287 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 ARMCX4Q5H9R4 360 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 C10orf128Q5T292 105 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 DEGS2Q6QHC5 323 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 ZNF322Q6U7Q0 402 aaPredicted RBP8.09□□□□□ -1.11
NR1I3-228ENST00000511676 PLEKHG7Q6ZR37 379 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 FOXL2NBQ6ZUU3 175 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 CREB3L2Q70SY1 520 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 TRILQ7L0X0 811 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.09□□□□□ -1.11
NR1I3-228ENST00000511676 CLVS1Q8IUQ0 354 aaPredicted RBP8.09□□□□□ -1.11
NR1I3-228ENST00000511676 SLC35F2Q8IXU6 374 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 OR6V1Q8N148 313 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 OR4F15Q8NGB8 312 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 OR5M1Q8NGP8 315 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 RNF128Q8TEB7 428 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 ABTB1Q969K4 478 aaPredicted RBP8.09□□□□□ -1.11
NR1I3-228ENST00000511676 TMIGD2Q96BF3 282 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 LRRC46Q96FV0 321 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 OPALINQ96PE5 141 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 INTS14Q96SY0 518 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 WACQ9BTA9 647 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 FUNDC2Q9BWH2 189 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 HES7Q9BYE0 225 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 PRDM14Q9GZV8 571 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 NUAK2Q9H093 628 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 TRIM36Q9NQ86 728 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 MCTS1Q9ULC4 181 aaKnown RBP8.09□□□□□ -1.11
NR1I3-228ENST00000511676 SHANK1Q9Y566 2161 aa8.09□□□□□ -1.11
NR1I3-228ENST00000511676 HIVEP3Q5T1R4 2406 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 SLC35F4A4IF30 521 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 ZNF726A6NNF4 738 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 ZNF716A6NP11 495 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 FAM166BA8MTA8 275 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 ZNF724A8MTY0 619 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 H3BMQ9 156 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 H3BSA7 217 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 CXCL13O43927 109 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 SLC16A7O60669 478 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 ZG16O60844 167 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 TMCC2O75069 709 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 ZNF432O94892 652 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 SYNGR4O95473 234 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 F10P00742 488 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 PLGP00747 810 aaPredicted RBP8.08□□□□□ -1.12
NR1I3-228ENST00000511676 TACSTD2P09758 323 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 CLUP10909 449 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 HLA-DOBP13765 273 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 CD36P16671 472 aa8.08□□□□□ -1.12
NR1I3-228ENST00000511676 GABRA5P31644 462 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms