RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 SLC35E2BP0CK96 405 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 SLC35E2P0CK97 266 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 SELEP16581 610 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 HIST1H1TP22492 207 aaPredicted RBP4.99□□□□□ -1.61
USP53-206ENST00000510737 IGHV1-2P23083 117 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 PCGF2P35227 344 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 KHKP50053 298 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 IDH3GP51553 393 aaPredicted RBP4.99□□□□□ -1.61
USP53-206ENST00000510737 CALCOCO2Q13137 446 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 BAMBIQ13145 260 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 MORF4L2Q15014 288 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 SLC9A3R2Q15599 337 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 TAF9Q16594 264 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 TMEM44Q2T9K0 475 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 ASTE1Q2TB18 679 aaPredicted RBP4.99□□□□□ -1.61
USP53-206ENST00000510737 ANKRD22Q5VYY1 191 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 ZNF470Q6ECI4 717 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 NEPROQ6NW34 567 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 C17orf107Q6ZR85 190 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 Q6ZT83 130 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 TEX29Q8N6K0 151 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 Q8NBF4 154 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 TTLQ8NG68 377 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 OR4K17Q8NGC6 315 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 OR52N5Q8NH56 324 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 ZNF519Q8TB69 540 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 ABHD3Q8WU67 409 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 RASL10AQ92737 203 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 TMCO6Q96DC7 493 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 VPS39Q96JC1 886 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 NAP1L5Q96NT1 182 aaPredicted RBP4.99□□□□□ -1.61
USP53-206ENST00000510737 COL21A1Q96P44 957 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 NDNQ99608 321 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 TBCDQ9BTW9 1192 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 DGCR6LQ9BY27 220 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 OSBPL8Q9BZF1 889 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 RTN4RQ9BZR6 473 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 NT5DC2Q9H857 520 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 HHATLQ9HCP6 504 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 FBXO6Q9NRD1 293 aaPredicted RBP4.99□□□□□ -1.61
USP53-206ENST00000510737 OPN4Q9UHM6 478 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 MCTS1Q9ULC4 181 aaKnown RBP4.99□□□□□ -1.61
USP53-206ENST00000510737 PPP1R3CQ9UQK1 317 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.99□□□□□ -1.61
USP53-206ENST00000510737 SLC25A15Q9Y619 301 aa4.99□□□□□ -1.61
USP53-206ENST00000510737 A0A0J9YW62 118 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 OR6C70A6NIJ9 312 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 SAP18O00422 153 aaKnown RBP4.98□□□□□ -1.61
USP53-206ENST00000510737 ADAMDEC1O15204 470 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 PFDN6O15212 129 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 IDH3BO43837 385 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 TSPAN2O60636 221 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 SH3BGRLO75368 114 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 SCELO95171 688 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 SYNGR4O95473 234 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 IGHV3-13P01766 116 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 CLEC3BP05452 202 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 GGT1P19440 569 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 OGNP20774 298 aaKnown RBP4.98□□□□□ -1.61
USP53-206ENST00000510737 DRD5P21918 477 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 SNRPD2P62316 118 aaKnown RBP4.98□□□□□ -1.61
USP53-206ENST00000510737 TRA2BP62995 288 aaKnown RBP4.98□□□□□ -1.61
USP53-206ENST00000510737 PLCXD2Q0VAA5 305 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 PLA2G7Q13093 441 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 SLMAPQ14BN4 828 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 PRUNE1Q86TP1 453 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 ZNF433Q8N7K0 673 aaPredicted RBP4.98□□□□□ -1.61
USP53-206ENST00000510737 CEP112Q8N8E3 955 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 OR7G1Q8NGA0 311 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 OR51F2Q8NH61 342 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 ANKRD7Q92527 254 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 OSTF1Q92882 214 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 TMBIM1Q969X1 311 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 PELOQ9BRX2 385 aaKnown RBP4.98□□□□□ -1.61
USP53-206ENST00000510737 KIFC1Q9BW19 673 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 ITPAQ9BY32 194 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 RAB1BQ9H0U4 201 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 NARFLQ9H6Q4 476 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 ANKZF1Q9H8Y5 726 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 OSGIN1Q9UJX0 560 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 MAD1L1Q9Y6D9 718 aa4.98□□□□□ -1.61
USP53-206ENST00000510737 ABCA13Q86UQ4 5058 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 ARFGEF3Q5TH69 2177 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 KIAA1109Q2LD37 5005 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 C9JVG2 144 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 ATP6V1G2-DDX39BF2Z307 99 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 CLDN34H7C241 214 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 TNFSF11O14788 317 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 PGRMC2O15173 223 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 NME6O75414 186 aaPredicted RBP4.97□□□□□ -1.61
USP53-206ENST00000510737 REM1O75628 298 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 YES1P07947 543 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 ETS1P14921 441 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 COL8A2P25067 703 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 PPICP45877 212 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 OR3A2P47893 321 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 NPY2RP49146 381 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 AP1S2P56377 157 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 MYL5Q02045 173 aa4.97□□□□□ -1.61
USP53-206ENST00000510737 TNFRSF17Q02223 184 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms