RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 OR2T12Q8NG77 320 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 SHARPINQ9H0F6 387 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 INIPQ9NRY2 104 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 MAN2C1Q9NTJ4 1040 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 REV1Q9UBZ9 1251 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 SPEF1Q9Y4P9 236 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 TANC2Q9HCD6 1990 aa13.91□□□□□ -0.18
LMNA-222ENST00000508500 A0A1W2PRG6 482 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 ELOVL7A1L3X0 281 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 J3KTA2 159 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 M0R233 179 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 FFAR1O14842 300 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 PHF1O43189 567 aaPredicted RBP13.9□□□□□ -0.18
LMNA-222ENST00000508500 TGFAP01135 160 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 FAM157BP0CG42 384 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 THRBP10828 461 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 CDAP32320 146 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 YAP1P46937 504 aaKnown RBP13.9□□□□□ -0.18
LMNA-222ENST00000508500 PSME3P61289 254 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 GALK2Q01415 458 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 FMODQ06828 376 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 FHL1Q13642 323 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 C10orf128Q5T292 105 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 VTCN1Q7Z7D3 282 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 MEX3DQ86XN8 651 aaKnown RBP13.9□□□□□ -0.18
LMNA-222ENST00000508500 C10orf67Q8IYJ2 551 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 CLDN22Q8N7P3 220 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 LRRC75AQ8NAA5 344 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 ZNF540Q8NDQ6 660 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 SLC30A7Q8NEW0 376 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 TMEM158Q8WZ71 300 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 YIPF5Q969M3 257 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 NABP1Q96AH0 204 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 TPD52L3Q96J77 140 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 TSPAN32Q96QS1 320 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 THTPAQ9BU02 230 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 RASSF4Q9H2L5 321 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 SPAG4Q9NPE6 437 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 LPAR3Q9UBY5 353 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 SLC7A8Q9UHI5 535 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 FBXL3Q9UKT7 428 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 KCNS2Q9ULS6 477 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 HIF3AQ9Y2N7 669 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 MED31Q9Y3C7 131 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 WNK2Q9Y3S1 2297 aa13.9□□□□□ -0.18
LMNA-222ENST00000508500 CENPBD1B2RD01 187 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 ANKRD65E5RJM6 399 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 MGRN1O60291 552 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 CIB2O75838 187 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 NCR1O76036 304 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 NAT2P11245 290 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 MAKP20794 623 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 NRN1LQ496H8 165 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 SLC25A47Q6Q0C1 308 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 SLC16A14Q7RTX9 510 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 TSEN54Q7Z6J9 526 aaKnown RBP13.89□□□□□ -0.19
LMNA-222ENST00000508500 LRRC18Q8N456 261 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 CPEB3Q8NE35 698 aaKnown RBP13.89□□□□□ -0.19
LMNA-222ENST00000508500 UTP4Q969X6 686 aaKnown RBP13.89□□□□□ -0.19
LMNA-222ENST00000508500 C1orf159Q96HA4 380 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 PRRC1Q96M27 445 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 SNX18Q96RF0 628 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 OR51B6Q9H340 312 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 TXNIPQ9H3M7 391 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 MS4A5Q9H3V2 200 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 RNF121Q9H920 327 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 RHCGQ9UBD6 479 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 ABCD2Q9UBJ2 740 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 DUSP13Q9UII6 198 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 NBEAL1Q6ZS30 2694 aa13.89□□□□□ -0.19
LMNA-222ENST00000508500 IGLV3-9A0A075B6K5 115 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 NPIPB13A6NJU9 1138 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 NPIPB4C9JG80 1138 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 MCIDASD6RGH6 385 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 NME4O00746 187 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 WNT9BO14905 357 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 FARS2O95363 451 aaKnown RBP13.88□□□□□ -0.19
LMNA-222ENST00000508500 IFNA14P01570 189 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 ERCC1P07992 297 aaPredicted RBP13.88□□□□□ -0.19
LMNA-222ENST00000508500 IFI30P13284 250 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 DAP3P51398 398 aaKnown RBP13.88□□□□□ -0.19
LMNA-222ENST00000508500 SRSF2Q01130 221 aaKnown RBP13.88□□□□□ -0.19
LMNA-222ENST00000508500 RIPK1Q13546 671 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 ALKBH6Q3KRA9 238 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 KRTAP24-1Q3LI83 254 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 SLC36A2Q495M3 483 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 TMEM255AQ5JRV8 349 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 SAMD4BQ5PRF9 694 aaKnown RBP13.88□□□□□ -0.19
LMNA-222ENST00000508500 RGS7BPQ6MZT1 257 aaPredicted RBP13.88□□□□□ -0.19
LMNA-222ENST00000508500 TMEM53Q6P2H8 277 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 CDRT15Q96T59 188 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 ZNF346Q9UL40 294 aaKnown RBP13.88□□□□□ -0.19
LMNA-222ENST00000508500 ANK2Q01484 3957 aa13.88□□□□□ -0.19
LMNA-222ENST00000508500 PRSS23O95084 383 aa13.87□□□□□ -0.19
LMNA-222ENST00000508500 SNAP29O95721 258 aa13.87□□□□□ -0.19
LMNA-222ENST00000508500 ZNF250P15622 560 aa13.87□□□□□ -0.19
LMNA-222ENST00000508500 ZNF32P17041 273 aa13.87□□□□□ -0.19
LMNA-222ENST00000508500 APEX1P27695 318 aaKnown RBP13.87□□□□□ -0.19
LMNA-222ENST00000508500 THBS2P35442 1172 aa13.87□□□□□ -0.19
LMNA-222ENST00000508500 MAGEB1P43366 347 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms