RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 TPD52L2O43399 206 aaKnown RBP9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 PIP5K1CO60331 668 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 VENTXO95231 258 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 DRD4P21917 467 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 CCNOP22674 350 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 OR1E2P47887 323 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 MRPS34P82930 218 aaKnown RBP9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 FMODQ06828 376 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 CD47Q08722 323 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 TOP3AQ13472 1001 aaPredicted RBP9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 PIN1Q13526 163 aaPredicted RBP9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 TSTQ16762 297 aaKnown RBP9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 MMEL1Q495T6 779 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 ARMC4Q5T2S8 1044 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 METTL21CQ5VZV1 264 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 THSD4Q6ZMP0 1018 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 USP51Q70EK9 711 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 SEMA6DQ8NFY4 1073 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 OR8J3Q8NGG0 315 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 NSMAFQ92636 917 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 HDAC2Q92769 488 aaKnown RBP9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 NABP1Q96AH0 204 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 LRRC58Q96CX6 371 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 NMD3Q96D46 503 aaKnown RBP9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 SH3GL1Q99961 368 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 ECSITQ9BQ95 431 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 TMEM120AQ9BXJ8 343 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 POLR2J2Q9GZM3 115 aaKnown RBP9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 POLR2J3Q9H1A7 115 aaKnown RBP9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 KCNN2Q9H2S1 579 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 ZNF665Q9H7R5 613 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 SIAEQ9HAT2 523 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 NKIRAS2Q9NYR9 191 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 STX18Q9P2W9 335 aaKnown RBP9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 MED31Q9Y3C7 131 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 UGT2A1Q9Y4X1 527 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 TRAV20A0A0B4J274 112 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 MGRN1O60291 552 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 RGS9O75916 674 aaPredicted RBP9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 IGF2P01344 180 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 IGHV3-13P01766 116 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 MT-ND5P03915 603 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 TSPAN19P0C672 248 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 ZNF32P17041 273 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 STOMP27105 288 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 CRYBB2P43320 205 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 TEKQ02763 1124 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 LAPTM4AQ15012 233 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 SGCAQ16586 387 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 LRRC23Q53EV4 343 aaPredicted RBP9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 TMEM255AQ5JRV8 349 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 SPATA46Q5T0L3 261 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 FAHD2BQ6P2I3 314 aaPredicted RBP9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 ERICH5Q6P6B1 374 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 AKR7LQ8NHP1 331 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 LIPHQ8WWY8 451 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 FAHD2AQ96GK7 314 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 POM121L2Q96KW2 1035 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 SAP30LQ9HAJ7 183 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 SMURF2Q9HAU4 748 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 DECR2Q9NUI1 292 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 CACNG2Q9Y698 323 aa9.83□□□□□ -0.84
HMGCS1-204ENST00000507293 LOC100509620A0A075B734 347 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 A0A0A6YYJ9 748 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 C5orf49A4QMS7 147 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 GMNCA6NCL1 334 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 NPIPB13A6NJU9 1138 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 BBIP1A8MTZ0 92 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 FAM220BPB1ANY3 271 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 CLDN25C9JDP6 229 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 NPIPB4C9JG80 1138 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 SPRY3O43610 288 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 MPZL1O95297 269 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 PNPP00491 289 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 IFNA14P01570 189 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 IGHV1-46P01743 117 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 THRBP10828 461 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 IFI30P13284 250 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 MAKP20794 623 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 GCH1P30793 250 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 MPV17P39210 176 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 WNT5AP41221 380 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 GDI2P50395 445 aaKnown RBP9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 ZNF81P51508 661 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 ERVK-25P63136 954 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 KLF10Q13118 480 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 SCGB2A2Q13296 93 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 MOGQ16653 247 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 ZNF718Q3SXZ3 478 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 CYBRD1Q53TN4 286 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 ALG10Q5BKT4 473 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 COQ5Q5HYK3 327 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 ACSM5Q6NUN0 579 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 SLC25A47Q6Q0C1 308 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 C12orf54Q6X4T0 127 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 C1orf229Q6ZS94 237 aaPredicted RBP9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 RFPL4BQ6ZWI9 263 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 HDXQ7Z353 690 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 IGFN1Q86VF2 1251 aa9.82□□□□□ -0.84
HMGCS1-204ENST00000507293 ZNF101Q8IZC7 436 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms