RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 PYDC1Q8WXC3 89 aa15.81■□□□□ 0.12
NPHP4-210ENST00000506941 LRTOMTQ8WZ04 291 aa15.81■□□□□ 0.12
NPHP4-210ENST00000506941 DENND2DQ9H6A0 471 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-210ENST00000506941 TBC1D23Q9NUY8 699 aa15.81■□□□□ 0.12
NPHP4-210ENST00000506941 PLEKHA6Q9Y2H5 1048 aa15.81■□□□□ 0.12
NPHP4-210ENST00000506941 ATP6V1G2-DDX39BF2Z307 99 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 DCTN6O00399 190 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 ATE1O95260 518 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 SCG5P05408 212 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 GIPRP48546 466 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 NPRL3Q12980 569 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 C3orf36Q3SXR2 165 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 SLC35F1Q5T1Q4 408 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 B3GLCTQ6Y288 498 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 AMIGO2Q86SJ2 522 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 LRRC18Q8N456 261 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 OR4Q3Q8NH05 313 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 OR4K13Q8NH42 304 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 MS4A3Q96HJ5 214 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 FOXN4Q96NZ1 517 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 NMNAT3Q96T66 252 aa15.8■□□□□ 0.12
NPHP4-210ENST00000506941 ARFGEF3Q5TH69 2177 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 A0A1W2PPL8 197 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 H3BNX3 289 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 IDH3BO43837 385 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 UBL3O95164 117 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 FARS2O95363 451 aaKnown RBP15.79■□□□□ 0.12
NPHP4-210ENST00000506941 ZNF14P17017 642 aaPredicted RBP15.79■□□□□ 0.12
NPHP4-210ENST00000506941 PAX7P23759 505 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 FASP25445 335 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 CALCRP30988 508 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 ARR3P36575 388 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 PTDSS1P48651 473 aaKnown RBP15.79■□□□□ 0.12
NPHP4-210ENST00000506941 CDH11P55287 796 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 RAB1AP62820 205 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 NAAAQ02083 359 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 COX10Q12887 443 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 SGCAQ16586 387 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 SLC36A3Q495N2 470 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 LEG1Q6P5S2 330 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 SLC22A25Q6T423 547 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 LNX2Q8N448 690 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 SDR9C7Q8NEX9 313 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 OR5K1Q8NHB7 308 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 NANOS1Q8WY41 292 aaKnown RBP15.79■□□□□ 0.12
NPHP4-210ENST00000506941 NRBF2Q96F24 287 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 TSSK2Q96PF2 358 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 TSSK6Q9BXA6 273 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 NUAK2Q9H093 628 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 FN3KQ9H479 309 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 SIAEQ9HAT2 523 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 MOV10Q9HCE1 1003 aaKnown RBP15.79■□□□□ 0.12
NPHP4-210ENST00000506941 MOKQ9UQ07 419 aa15.79■□□□□ 0.12
NPHP4-210ENST00000506941 PRRC2AP48634 2157 aaKnown RBP15.79■□□□□ 0.12
NPHP4-210ENST00000506941 CREBBPQ92793 2442 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 ARID1AO14497 2285 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 OR6C68A6NDL8 312 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 SLC16A7O60669 478 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 RAF1P04049 648 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 MMP7P09237 267 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-210ENST00000506941 FCGR1AP12314 374 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 ANXA8P13928 327 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 CD53P19397 219 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 NPR2P20594 1047 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 NOS3P29474 1203 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.78■□□□□ 0.12
NPHP4-210ENST00000506941 ZNF362Q5T0B9 420 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-210ENST00000506941 FAM27BQ5VT28 67 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 FAHD1Q6P587 224 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 SLC16A14Q7RTX9 510 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 JAZF1Q86VZ6 243 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 ZNF584Q8IVC4 421 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 NPEPL1Q8NDH3 523 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 IGFBPL1Q8WX77 278 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 FBXW5Q969U6 566 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 FBXO17Q96EF6 278 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 RADILQ96JH8 1075 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 RAB3IPQ96QF0 476 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-210ENST00000506941 SNX18Q96RF0 628 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 RERGLQ9H628 205 aa15.78■□□□□ 0.12
NPHP4-210ENST00000506941 COA3Q9Y2R0 106 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-210ENST00000506941 CHD3Q12873 2000 aaKnown RBP15.77■□□□□ 0.12
NPHP4-210ENST00000506941 IGLV1-36A0A0B4J1U3 117 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 IGHV2OR16-5A0A0B4J2B6 119 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 E7EQL1 145 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 MGRN1O60291 552 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 ENTPD5O75356 428 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 RAB36O95755 333 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 GPANK1O95872 356 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 LAP3P28838 519 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 DAPP51397 102 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 GABPB1Q06547 395 aaPredicted RBP15.77■□□□□ 0.12
NPHP4-210ENST00000506941 ENDOGQ14249 297 aaKnown RBP15.77■□□□□ 0.12
NPHP4-210ENST00000506941 RAB39AQ14964 217 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 OTPQ5XKR4 325 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 UGT2A3Q6UWM9 527 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 C20orf204Q6ZNR8 217 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 IQCF1Q8N6M8 205 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 ZNF611Q8N823 705 aa15.77■□□□□ 0.12
NPHP4-210ENST00000506941 ATG16L2Q8NAA4 619 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms