RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	ACSM5	Q6NUN0	579 aa		12.91	□□□□□ -0.34
CNBP-208	ENST00000504813	PRSS57	Q6UWY2	283 aa		12.91	□□□□□ -0.34
CNBP-208	ENST00000504813	HIST3H2A	Q7L7L0	130 aa		12.91	□□□□□ -0.34
CNBP-208	ENST00000504813	OR8D4	Q8NGM9	314 aa		12.91	□□□□□ -0.34
CNBP-208	ENST00000504813	OR52N5	Q8NH56	324 aa		12.91	□□□□□ -0.34
CNBP-208	ENST00000504813	TMEM171	Q8WVE6	324 aa		12.91	□□□□□ -0.34
CNBP-208	ENST00000504813	HIST1H2AC	Q93077	130 aa		12.91	□□□□□ -0.34
CNBP-208	ENST00000504813	FBXW5	Q969U6	566 aa		12.91	□□□□□ -0.34
CNBP-208	ENST00000504813	PERP	Q96FX8	193 aa		12.91	□□□□□ -0.34
CNBP-208	ENST00000504813	SLCO5A1	Q9H2Y9	848 aa		12.91	□□□□□ -0.34
CNBP-208	ENST00000504813	PLCXD1	Q9NUJ7	323 aa		12.91	□□□□□ -0.34
CNBP-208	ENST00000504813	BAIAP2	Q9UQB8	552 aa		12.91	□□□□□ -0.34
CNBP-208	ENST00000504813	SIGLEC7	Q9Y286	467 aa		12.91	□□□□□ -0.34
CNBP-208	ENST00000504813	TRAV36DV7	A0A075B6V5	113 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	TRAV27	A0A087WT01	109 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813		A0A1W2PR80	420 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	SHISA9	B4DS77	424 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813		M0R129	80 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	TLX2	O43763	284 aa	Predicted RBP	12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	OR2T1	O43869	369 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	MRPS14	O60783	128 aa	Known RBP	12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	TMCC2	O75069	709 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	PTP4A3	O75365	173 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	NDUFB2	O95178	105 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	DANCR	P0C864	163 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	MPG	P29372	298 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	GRK5	P34947	590 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	PTH2R	P49190	550 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	SELENOP	P49908	381 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	RIPPLY3	P57055	190 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	SMN1	Q16637	294 aa	Known RBP	12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	ANKDD1A	Q495B1	522 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	KDM8	Q8N371	416 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	WDR31	Q8NA23	367 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	POMGNT2	Q8NAT1	580 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	C1orf162	Q8NEQ5	155 aa	Predicted RBP	12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	MYDGF	Q969H8	173 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	BOD1	Q96IK1	185 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	TNFRSF13C	Q96RJ3	184 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	CCDC90B	Q9GZT6	254 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	NANS	Q9NR45	359 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	ZNF701	Q9NV72	531 aa	Predicted RBP	12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	B3GAT1	Q9P2W7	334 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	IL20RA	Q9UHF4	553 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	ZFHX3	Q15911	3703 aa		12.9	□□□□□ -0.34
CNBP-208	ENST00000504813	ABCD4	O14678	606 aa		12.89	□□□□□ -0.35
CNBP-208	ENST00000504813	RGS10	O43665	173 aa		12.89	□□□□□ -0.35
CNBP-208	ENST00000504813	PRPS1	P60891	318 aa		12.89	□□□□□ -0.35
CNBP-208	ENST00000504813	ZNF74	Q16587	644 aa		12.89	□□□□□ -0.35
CNBP-208	ENST00000504813	OCLN	Q16625	522 aa		12.89	□□□□□ -0.35
CNBP-208	ENST00000504813	SLC25A30	Q5SVS4	291 aa		12.89	□□□□□ -0.35
CNBP-208	ENST00000504813	C17orf78	Q8N4C9	275 aa		12.89	□□□□□ -0.35
CNBP-208	ENST00000504813	OR4Q3	Q8NH05	313 aa		12.89	□□□□□ -0.35
CNBP-208	ENST00000504813	TMEM163	Q8TC26	289 aa		12.89	□□□□□ -0.35
CNBP-208	ENST00000504813	DUSP21	Q9H596	190 aa		12.89	□□□□□ -0.35
CNBP-208	ENST00000504813	SLC17A5	Q9NRA2	495 aa		12.89	□□□□□ -0.35
CNBP-208	ENST00000504813	LAMP3	Q9UQV4	416 aa		12.89	□□□□□ -0.35
CNBP-208	ENST00000504813	RPL36	Q9Y3U8	105 aa	Known RBP	12.89	□□□□□ -0.35
CNBP-208	ENST00000504813	USF3	Q68DE3	2245 aa		12.89	□□□□□ -0.35
CNBP-208	ENST00000504813	DPPA5	A6NC42	116 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	EFCAB10	A6NFE3	127 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813		M0R082	166 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813		M0R3G1	203 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	OVOL3	O00110	214 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	PRKY	O43930	277 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	ENTPD6	O75354	484 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	MT-ATP6	P00846	226 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	SOD3	P08294	240 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	GTF2E2	P29084	291 aa	Known RBP	12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	NOS3	P29474	1203 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	GRPR	P30550	384 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	RPL4	P36578	427 aa	Known RBP	12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	TGFBR3	Q03167	851 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	LTB	Q06643	244 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	LGALS3BP	Q08380	585 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	NIPAL3	Q6P499	406 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	LINGO2	Q7L985	606 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	LNX2	Q8N448	690 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	SVOP	Q8N4V2	548 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	OR6S1	Q8NH40	331 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	ZNF417	Q8TAU3	575 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	SMAP2	Q8WU79	429 aa	Predicted RBP	12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	LIPH	Q8WWY8	451 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	LRR1	Q96L50	414 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	OXGR1	Q96P68	337 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	ZNF587	Q96SQ5	575 aa	Predicted RBP	12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	COPS4	Q9BT78	406 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	GSX1	Q9H4S2	264 aa	Predicted RBP	12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	CXorf56	Q9H5V9	222 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	FKRP	Q9H9S5	495 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	NDUFA13	Q9P0J0	144 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	H2AFY2	Q9P0M6	372 aa	Predicted RBP	12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	PSORS1C1	Q9UIG5	152 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	ZNF229	Q9UJW7	825 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	B3GALT5	Q9Y2C3	310 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	LOC102725191	A0A1B0GVB3	256 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813		A6NHS1	94 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	TRIM64C	A6NLI5	447 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	RIIAD1	A6NNX1	92 aa		12.88	□□□□□ -0.35
CNBP-208	ENST00000504813	SURF4	O15260	269 aa		12.88	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms