RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 SONP18583 2426 aaKnown RBP12.29□□□□□ -0.44
HOXC9-202ENST00000504557 TEX13CA0A0J9YWL9 993 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 IQCMA0A1B0GVH7 501 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 HTR3EA5X5Y0 456 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 XKRYO14609 159 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 GADD45GO95257 159 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 IGHMP01871 453 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 ZNF26P17031 533 aaPredicted RBP12.29□□□□□ -0.44
HOXC9-202ENST00000504557 APEX1P27695 318 aaKnown RBP12.29□□□□□ -0.44
HOXC9-202ENST00000504557 GGTLC2Q14390 218 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 MAD2L1BPQ15013 274 aaPredicted RBP12.29□□□□□ -0.44
HOXC9-202ENST00000504557 TAF11Q15544 211 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 EFNB3Q15768 340 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 MSMPQ1L6U9 139 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 TBC1D28Q2M2D7 210 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 PABPC1L2AQ5JQF8 200 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 C10orf128Q5T292 105 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 OTPQ5XKR4 325 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 SLC25A47Q6Q0C1 308 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 DNM1P46Q6ZS02 220 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 TMPRSS11FQ6ZWK6 438 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 LRP11Q86VZ4 500 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 AKR7LQ8NHP1 331 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 ZNF519Q8TB69 540 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 RASD2Q96D21 266 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 NSL1Q96IY1 281 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 RSRC1Q96IZ7 334 aaKnown RBP12.29□□□□□ -0.44
HOXC9-202ENST00000504557 ZNF570Q96NI8 536 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 SEPHS2Q99611 448 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 ALG12Q9BV10 488 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 NDEL1Q9GZM8 345 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 RAB1BQ9H0U4 201 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 ANKRD19PQ9H560 264 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 YAE1D1Q9NRH1 226 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 FBXL3Q9UKT7 428 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 UGT2A1Q9Y4X1 527 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 NF1P21359 2839 aa12.29□□□□□ -0.44
HOXC9-202ENST00000504557 NSD1Q96L73 2696 aaPredicted RBP12.29□□□□□ -0.44
HOXC9-202ENST00000504557 A0A1W2PPW3 197 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 A0A1W2PRQ8 180 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 TMEM129A0AVI4 362 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 UNC119BA6NIH7 251 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 A6NIZ1 184 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 CENPBD1B2RD01 187 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 SOCS2O14508 198 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 FAM107AO95990 144 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 FABP3P05413 133 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 LCKP06239 509 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 ERCC1P07992 297 aaPredicted RBP12.28□□□□□ -0.44
HOXC9-202ENST00000504557 NR2C1P13056 603 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 ZNF32P17041 273 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 ITGA2P17301 1181 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 LAP3P28838 519 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 RRM2P31350 389 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 APLNRP35414 380 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 GUCA1AP43080 201 aaPredicted RBP12.28□□□□□ -0.44
HOXC9-202ENST00000504557 ALDH3B1P43353 468 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 PDLIM4P50479 330 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 DSCR9P59020 149 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 RAP1BP61224 184 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 ERVS71-1P61550 626 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 RAP1AP62834 184 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 MRPS34P82930 218 aaKnown RBP12.28□□□□□ -0.44
HOXC9-202ENST00000504557 DGCR6Q14129 220 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 THEM4Q5T1C6 240 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 FAM205BPQ63HN1 556 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 RINLQ6ZS11 566 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 ARIH2OSQ8N7S6 290 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 OR10H5Q8NGA6 315 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 C10orf105Q8TEF2 133 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 MRPL24Q96A35 216 aaKnown RBP12.28□□□□□ -0.44
HOXC9-202ENST00000504557 NABP1Q96AH0 204 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 DOK1Q99704 481 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 SIAEQ9HAT2 523 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 EMC7Q9NPA0 242 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 KRCC1Q9NPI7 259 aaPredicted RBP12.28□□□□□ -0.44
HOXC9-202ENST00000504557 MYEF2Q9P2K5 600 aaKnown RBP12.28□□□□□ -0.44
HOXC9-202ENST00000504557 SLC7A8Q9UHI5 535 aa12.28□□□□□ -0.44
HOXC9-202ENST00000504557 NPIPB13A6NJU9 1138 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 NPIPB4C9JG80 1138 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 OR10H3O60404 316 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 NDUFB2O95178 105 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 CD14P08571 375 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 ATP6V1B2P21281 511 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 GLRXP35754 106 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 OMPP47874 163 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 CENPAP49450 140 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 PPOXP50336 477 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 MNAT1P51948 309 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 RPS23P62266 143 aaKnown RBP12.27□□□□□ -0.45
HOXC9-202ENST00000504557 GLO1Q04760 184 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 KRTAP1-1Q07627 177 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 KRR1Q13601 381 aaKnown RBP12.27□□□□□ -0.45
HOXC9-202ENST00000504557 ANKDD1AQ495B1 522 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 IQCCQ4KMZ1 466 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 MESTQ5EB52 335 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 RGS7BPQ6MZT1 257 aaPredicted RBP12.27□□□□□ -0.45
HOXC9-202ENST00000504557 THSD4Q6ZMP0 1018 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.27□□□□□ -0.45
HOXC9-202ENST00000504557 ZDHHC21Q8IVQ6 265 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms