RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 OR52N5Q8NH56 324 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 NSMAFQ92636 917 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 NMNAT3Q96T66 252 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 DDOQ99489 341 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 CIB1Q99828 191 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 C9orf16Q9BUW7 83 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 SYT4Q9H2B2 425 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 SLC25A19Q9HC21 320 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 USE1Q9NZ43 259 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 KLHL21Q9UJP4 597 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 UGT2A1Q9Y4X1 527 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 HRNRQ86YZ3 2850 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 CHD3Q12873 2000 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 OR6C68A6NDL8 312 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 A6NNC1 897 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 DEFB108AA8MXU0 73 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 MITFO75030 526 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 KHDRBS3O75525 346 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 SEC14L2O76054 403 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 FARS2O95363 451 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 IFNGP01579 166 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 HMGN1P05114 100 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 ALPLP05186 524 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 OR8G3PP0DMU2 310 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 ANPEPP15144 967 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 B4GALT1P15291 398 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 CTLA4P16410 223 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 NPR2P20594 1047 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 IGFBP5P24593 272 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 CRABP1P29762 137 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 UBE2NP61088 152 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 DAG1Q14118 895 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 RCN1Q15293 331 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 BEX5Q5H9J7 111 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 DNM1P34Q6PK57 102 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 DPPA2Q7Z7J5 298 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 ZBTB46Q86UZ6 589 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 FAM169BQ8N8A8 192 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 SDR9C7Q8NEX9 313 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 NABP1Q96AH0 204 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 NUAK2Q9H093 628 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 DCLRE1BQ9H816 532 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 SIAEQ9HAT2 523 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 MOV10Q9HCE1 1003 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 CMC2Q9NRP2 79 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 B3GNT2Q9NY97 397 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 ZNF224Q9NZL3 707 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 FKBP7Q9Y680 259 aa10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 FLNBO75369 2602 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-208ENST00000504489 A0A1W2PR80 420 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 RIIAD1A6NNX1 92 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 SLC16A7O60669 478 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 SSTR2P30874 369 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 CDAP32320 146 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 GUCA1AP43080 201 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 ALDH3A2P51648 485 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 PTGES3Q15185 160 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 ETFDHQ16134 617 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 C3orf36Q3SXR2 165 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 FAM27BQ5VT28 67 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 ZNF771Q7L3S4 317 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 GLB1L2Q8IW92 636 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 SKA3Q8IX90 412 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 OR6V1Q8N148 313 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 CBR4Q8N4T8 237 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 IQCF1Q8N6M8 205 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 SLC37A3Q8NCC5 494 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 NANOS1Q8WY41 292 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 TEX12Q9BXU0 123 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 RACGAP1Q9H0H5 632 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 CRNNQ9UBG3 495 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 B9D1Q9UPM9 204 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 ORC6Q9Y5N6 252 aa10.39□□□□□ -0.75
PDLIM5-208ENST00000504489 ARFGEF3Q5TH69 2177 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 IGLV1-36A0A0B4J1U3 117 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 A0A1W2PPL8 197 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 ZAR1LA6NP61 321 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 DCTN6O00399 190 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 EI24O14681 340 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 SURF4O15260 269 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 CTAG2O75638 210 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 UBL3O95164 117 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 IGLV1-44P01699 117 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 HRGP04196 525 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 CBR1P16152 277 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 ZNF3P17036 446 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 LOXP28300 417 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 LAP3P28838 519 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 EPHA2P29317 976 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 SLC25A1P53007 311 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 RAD23AP54725 363 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 NR1H2P55055 460 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 TLE4Q04727 773 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 NPRL3Q12980 569 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 CRMP1Q14194 572 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 KCNMB1Q16558 191 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 SGCAQ16586 387 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 NCMAPQ5T1S8 102 aa10.38□□□□□ -0.75
PDLIM5-208ENST00000504489 TMEM236Q5W0B7 351 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms