RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 MUS81Q96NY9 551 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 SH3GL3Q99963 347 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 HDHD5Q9BXW7 423 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 SEC61A2Q9H9S3 476 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 SLC17A5Q9NRA2 495 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 CMC2Q9NRP2 79 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 TMEM38BQ9NVV0 291 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 CRIM1Q9NZV1 1036 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 B9D1Q9UPM9 204 aa11.62□□□□□ -0.55
PDLIM7-212ENST00000504380 IGLV1-36A0A0B4J1U3 117 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 TUBAL3A6NHL2 446 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 OR5H1A6NKK0 313 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 KHDRBS3O75525 346 aaKnown RBP11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 IFNGP01579 166 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 HMGN1P05114 100 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 IGFBP2P18065 325 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 KIR2DL3P43628 341 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 SORDQ00796 357 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 TGFBR3Q03167 851 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 RIPK1Q13546 671 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 TAB1Q15750 504 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 FBXW10Q5XX13 1052 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 PLBD1Q6P4A8 553 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 UGT2A3Q6UWM9 527 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 LYPD4Q6UWN0 246 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 CPOQ8IVL8 374 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 SKA3Q8IX90 412 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 DMRTC2Q8IXT2 367 aaPredicted RBP11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 LRRC18Q8N456 261 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 BBS1Q8NFJ9 593 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 PTP4A1Q93096 173 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 PLEKHA8Q96JA3 519 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 IL4I1Q96RQ9 567 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 MED18Q9BUE0 208 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 GRIP2Q9C0E4 1043 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 EMC7Q9NPA0 242 aa11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 HINT3Q9NQE9 182 aaKnown RBP11.61□□□□□ -0.55
PDLIM7-212ENST00000504380 ITPR2Q14571 2701 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 AHCYL1O43865 530 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 HLA-HP01893 362 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 ZNF3P17036 446 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 CAPZA2P47755 286 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 PIGFQ07326 219 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 MEP1BQ16820 701 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 OR7E24Q6IFN5 339 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 B3GLCTQ6Y288 498 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 SLC22A24Q8N4F4 322 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 TCEANCQ8N8B7 351 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 C1orf162Q8NEQ5 155 aaPredicted RBP11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 FNDC8Q8TC99 324 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 NABP1Q96AH0 204 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 SNX18Q96RF0 628 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 NMNAT2Q9BZQ4 307 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 OR51V1Q9H2C8 321 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 NOX3Q9HBY0 568 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 FAM118AQ9NWS6 357 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 SMPD3Q9NY59 655 aaPredicted RBP11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 AASSQ9UDR5 926 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 NDRG3Q9UGV2 375 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 ENOPH1Q9UHY7 261 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 SLC25A15Q9Y619 301 aa11.6□□□□□ -0.55
PDLIM7-212ENST00000504380 TVP23AA6NH52 213 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 PRR23D1E9PI22 279 aaPredicted RBP11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 E9PQ18 207 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 TLX2O43763 284 aaPredicted RBP11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 PRR23D2P0DMB1 279 aaPredicted RBP11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 CD79AP11912 226 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 NR2C1P13056 603 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 SPI1P17947 270 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 LAP3P28838 519 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 CRABP1P29762 137 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 GGT2P36268 569 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 PCYT1AP49585 367 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 ZNF83P51522 516 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 SH3BGRP55822 239 aaPredicted RBP11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 UBE2NP61088 152 aaKnown RBP11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 MRPS34P82930 218 aaKnown RBP11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 PPA1Q15181 289 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 TIMM23BQ5SRD1 257 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 FOXL2NBQ6ZUU3 175 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 CXXC5Q7LFL8 322 aaKnown RBP11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 PACRGLQ8N7B6 248 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 ACBD4Q8NC06 268 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 PROKR2Q8NFJ6 384 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 FAM81AQ8TBF8 368 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 CYGBQ8WWM9 190 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 C11orf40Q8WZ69 217 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 HSD17B8Q92506 261 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 SLC38A2Q96QD8 506 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 TEX12Q9BXU0 123 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 POLE4Q9NR33 117 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 ZNF224Q9NZL3 707 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 NPAP1Q9NZP6 1156 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 FKBP7Q9Y680 259 aa11.59□□□□□ -0.55
PDLIM7-212ENST00000504380 LOC100130705A0A1B0GUX0 176 aa11.58□□□□□ -0.56
PDLIM7-212ENST00000504380 CLIC3O95833 236 aa11.58□□□□□ -0.56
PDLIM7-212ENST00000504380 HLA-DQA2P01906 255 aa11.58□□□□□ -0.56
PDLIM7-212ENST00000504380 TFP02787 698 aa11.58□□□□□ -0.56
PDLIM7-212ENST00000504380 OR8G3PP0DMU2 310 aa11.58□□□□□ -0.56
PDLIM7-212ENST00000504380 COX6B1P14854 86 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 279.2 ms