RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CYSLTR2Q9NS75 346 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 IL20RAQ9UHF4 553 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 TRIM33Q9UPN9 1127 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 RNF114Q9Y508 228 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 A0A0B4J2E0 115 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 A0A1B0GX12 115 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 TLDC2A0PJX2 215 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 QDPRP09417 244 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 PGA4P0DJD7 388 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 PGA3P0DJD8 388 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 PRKAR1BP31321 381 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 ETV4P43268 484 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 BEAN1Q3B7T3 259 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 NRN1LQ496H8 165 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 PABPC1L2AQ5JQF8 200 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 ZNF774Q6NX45 483 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 RFPL4BQ6ZWI9 263 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 C10orf53Q8N6V4 93 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 OR10S1Q8NGN2 331 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 FAM110DQ8TAY7 271 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-236ENST00000498808 SLC25A44Q96H78 314 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-236ENST00000498808 PKNOX2Q96KN3 472 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 POM121L2Q96KW2 1035 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 RHOXF2Q9BQY4 288 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 CGGBP1Q9UFW8 167 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-236ENST00000498808 ZDHHC8Q9ULC8 765 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 LRCH1Q9Y2L9 728 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 RAP2CQ9Y3L5 183 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 DOCK11Q5JSL3 2073 aa13.08□□□□□ -0.32
HDAC6-236ENST00000498808 LOC100509620A0A075B734 347 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 IGHV2-70DA0A0C4DH43 119 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 TMEM247A6NEH6 219 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 CEACAM18A8MTB9 384 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 CLPXO76031 633 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 TGDSO95455 350 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 WNT2P09544 360 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 ZCCHC18P0CG32 403 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 STOMP27105 288 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 LIPAP38571 399 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 PROK1P58294 105 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 HSF2Q03933 536 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 FAM205BPQ63HN1 556 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 BTNL3Q6UXE8 466 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 LRRN1Q6UXK5 716 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 Q6YL49 198 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 NUDCD3Q8IVD9 361 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 LRRC18Q8N456 261 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 LINC01006Q8NI28 216 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 BBS10Q8TAM1 723 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 SORT1Q99523 831 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 TMEM43Q9BTV4 400 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 THUMPD1Q9NXG2 353 aaKnown RBP13.07□□□□□ -0.32
HDAC6-236ENST00000498808 TAS2R5Q9NYW4 299 aa13.07□□□□□ -0.32
HDAC6-236ENST00000498808 G3V4G9 280 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 TPST1O60507 370 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 TPST2O60704 377 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 MT-ATP6P00846 226 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 PRB2P02812 416 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-236ENST00000498808 SERPINE1P05121 402 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 THRBP10828 461 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 RPL14P50914 215 aaKnown RBP13.06□□□□□ -0.32
HDAC6-236ENST00000498808 ABCE1P61221 599 aaKnown RBP13.06□□□□□ -0.32
HDAC6-236ENST00000498808 PDCD1Q15116 288 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 OR1Q1Q15612 314 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 RAB40AQ8WXH6 277 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 MCHR2Q969V1 340 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 ZNF347Q96SE7 839 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 WFDC6Q9BQY6 131 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 SSBP3Q9BWW4 388 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-236ENST00000498808 MEAF6Q9HAF1 191 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 A4GALTQ9NPC4 353 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 NOX4Q9NPH5 578 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 SELENONQ9NZV5 590 aa13.06□□□□□ -0.32
HDAC6-236ENST00000498808 C5orf49A4QMS7 147 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 PIN1P1O15428 100 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 MGRN1O60291 552 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 ANP32DO95626 131 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 MELTFP08582 738 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 BMP2P12643 396 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 ETS2P15036 469 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 ZNF32P17041 273 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 MDH2P40926 338 aaKnown RBP13.05□□□□□ -0.32
HDAC6-236ENST00000498808 CDH12P55289 794 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 PPP1CBP62140 327 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 CDK5R2Q13319 367 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 RGNQ15493 299 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 HIST3H3Q16695 136 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 ZMAT1Q5H9K5 638 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 MTX3Q5HYI7 312 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 DHRS4L2Q6PKH6 230 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 TMEM86BQ8N661 226 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 HIPK4Q8NE63 616 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 ABHD4Q8TB40 342 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 SAMD8Q96LT4 415 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 ZBTB18Q99592 522 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 SLC19A3Q9BZV2 496 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 NANOGQ9H9S0 305 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 TMEM27Q9HBJ8 222 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 TCF7L1Q9HCS4 588 aa13.05□□□□□ -0.32
HDAC6-236ENST00000498808 ASH2LQ9UBL3 628 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms