RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 FGFBP3Q8TAT2 258 aa14.59□□□□□ -0.07
PRKCB-210ENST00000498739 PYDC1Q8WXC3 89 aa14.59□□□□□ -0.07
PRKCB-210ENST00000498739 LRTOMTQ8WZ04 291 aa14.59□□□□□ -0.07
PRKCB-210ENST00000498739 NABP1Q96AH0 204 aa14.59□□□□□ -0.07
PRKCB-210ENST00000498739 NMNAT3Q96T66 252 aa14.59□□□□□ -0.07
PRKCB-210ENST00000498739 KCNS3Q9BQ31 491 aa14.59□□□□□ -0.07
PRKCB-210ENST00000498739 BDH2Q9BUT1 245 aa14.59□□□□□ -0.07
PRKCB-210ENST00000498739 TSSK6Q9BXA6 273 aa14.59□□□□□ -0.07
PRKCB-210ENST00000498739 RNF121Q9H920 327 aa14.59□□□□□ -0.07
PRKCB-210ENST00000498739 ZNF556Q9HAH1 456 aa14.59□□□□□ -0.07
PRKCB-210ENST00000498739 SIAEQ9HAT2 523 aa14.59□□□□□ -0.07
PRKCB-210ENST00000498739 MOKQ9UQ07 419 aa14.59□□□□□ -0.07
PRKCB-210ENST00000498739 ATP6V1G2-DDX39BF2Z307 99 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 H3BN98 237 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 IDH3BO43837 385 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 SLC16A7O60669 478 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 RENP00797 406 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 CRYAAP02489 173 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 TP53P04637 393 aaPredicted RBP14.58□□□□□ -0.08
PRKCB-210ENST00000498739 ANXA8P13928 327 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 CTLA4P16410 223 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 NAAAQ02083 359 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 SLC36A2Q495M3 483 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 SLC36A3Q495N2 470 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 TMEM53Q6P2H8 277 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 C20orf204Q6ZNR8 217 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 AMIGO2Q86SJ2 522 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 ATG16L2Q8NAA4 619 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 SDR9C7Q8NEX9 313 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 OR52E2Q8NGJ4 325 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 OR5K1Q8NHB7 308 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 TEX47Q8TBZ9 253 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 NINJ1Q92982 152 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 FBXW5Q969U6 566 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 NRBF2Q96F24 287 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 FOXN4Q96NZ1 517 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 NUAK2Q9H093 628 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 KCNN2Q9H2S1 579 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 CISD1Q9NZ45 108 aaKnown RBP14.58□□□□□ -0.08
PRKCB-210ENST00000498739 KIF17Q9P2E2 1029 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 ATP23Q9Y6H3 246 aa14.58□□□□□ -0.08
PRKCB-210ENST00000498739 APCP25054 2843 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 MGRN1O60291 552 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 KHDRBS3O75525 346 aaKnown RBP14.57□□□□□ -0.08
PRKCB-210ENST00000498739 ATE1O95260 518 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.57□□□□□ -0.089e-7■■□□□ 14.1
PRKCB-210ENST00000498739 DNM1P34Q6PK57 102 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 FOXL2NBQ6ZUU3 175 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 DPPA2Q7Z7J5 298 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 ZNF611Q8N823 705 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 OR2T33Q8NG76 320 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 OR4Q3Q8NH05 313 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 MS4A3Q96HJ5 214 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 TSSK2Q96PF2 358 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 SNX18Q96RF0 628 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 CCL19Q99731 98 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 CCNB1IP1Q9NPC3 277 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 REV1Q9UBZ9 1251 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 ITGB1BP2Q9UKP3 347 aa14.57□□□□□ -0.08
PRKCB-210ENST00000498739 COA3Q9Y2R0 106 aaPredicted RBP14.57□□□□□ -0.08
PRKCB-210ENST00000498739 HRNRQ86YZ3 2850 aaPredicted RBP14.56□□□□□ -0.08
PRKCB-210ENST00000498739 G3V2T6 193 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 ZNF14P17017 642 aaPredicted RBP14.56□□□□□ -0.08
PRKCB-210ENST00000498739 ZNF23P17027 643 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 CD53P19397 219 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 MSR1P21757 451 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 POU1F1P28069 291 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 LAP3P28838 519 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 CENPAP49450 140 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 GABPB1Q06547 395 aaPredicted RBP14.56□□□□□ -0.08
PRKCB-210ENST00000498739 RAB39AQ14964 217 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 FAM27BQ5VT28 67 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 B3GLCTQ6Y288 498 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 HIPK1Q86Z02 1210 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 LNX2Q8N448 690 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 ZNF75AQ96N20 296 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 SEMA6AQ9H2E6 1030 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 FN3KQ9H479 309 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 SRA1Q9HD15 236 aaKnown RBP14.56□□□□□ -0.08
PRKCB-210ENST00000498739 RPRD1BQ9NQG5 326 aaKnown RBP14.56□□□□□ -0.08
PRKCB-210ENST00000498739 POLE4Q9NR33 117 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 FBXL3Q9UKT7 428 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 BAIAP2Q9UQB8 552 aa14.56□□□□□ -0.08
PRKCB-210ENST00000498739 E7EQL1 145 aa14.55□□□□□ -0.08
PRKCB-210ENST00000498739 DCTN6O00399 190 aa14.55□□□□□ -0.08
PRKCB-210ENST00000498739 SCG5P05408 212 aa14.55□□□□□ -0.08
PRKCB-210ENST00000498739 CST2P09228 141 aa14.55□□□□□ -0.08
PRKCB-210ENST00000498739 MMP7P09237 267 aaPredicted RBP14.55□□□□□ -0.08
PRKCB-210ENST00000498739 OSMP13725 252 aa14.55□□□□□ -0.08
PRKCB-210ENST00000498739 ZNF32P17041 273 aa14.55□□□□□ -0.08
PRKCB-210ENST00000498739 CRABP1P29762 137 aa14.55□□□□□ -0.08
PRKCB-210ENST00000498739 CALCRP30988 508 aa14.55□□□□□ -0.08
PRKCB-210ENST00000498739 DBPQ10586 325 aaPredicted RBP14.55□□□□□ -0.08
PRKCB-210ENST00000498739 ZFP1Q6P2D0 407 aa14.55□□□□□ -0.08
PRKCB-210ENST00000498739 ZDHHC13Q8IUH4 622 aa14.55□□□□□ -0.08
PRKCB-210ENST00000498739 GLB1L2Q8IW92 636 aa14.55□□□□□ -0.08
PRKCB-210ENST00000498739 IQCF1Q8N6M8 205 aa14.55□□□□□ -0.08
PRKCB-210ENST00000498739 SMAP2Q8WU79 429 aaPredicted RBP14.55□□□□□ -0.08
PRKCB-210ENST00000498739 EMC7Q9NPA0 242 aa14.55□□□□□ -0.08
PRKCB-210ENST00000498739 B9D1Q9UPM9 204 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms