RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 SLC25A28Q96A46 364 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 PEX11GQ96HA9 241 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 BMFQ96LC9 184 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 C1QTNF7Q9BXJ2 289 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 PARD6GQ9BYG4 376 aaPredicted RBP8.08□□□□□ -1.12
FN1-227ENST00000498719 HDHD2Q9H0R4 259 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 GALNT9Q9HCQ5 603 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 MCUBQ9NWR8 336 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 MAT2BQ9NZL9 334 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 RASD1Q9Y272 281 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 SIGLEC7Q9Y286 467 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 PRR23D1E9PI22 279 aaPredicted RBP8.08□□□□□ -1.12
FN1-227ENST00000498719 CDC123O75794 336 aaPredicted RBP8.08□□□□□ -1.12
FN1-227ENST00000498719 ZNF205O95201 554 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 NGFRP08138 427 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 TRAPPC2P0DI81 140 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 TRAPPC2BP0DI82 140 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 PRR23D2P0DMB1 279 aaPredicted RBP8.08□□□□□ -1.12
FN1-227ENST00000498719 HOXB2P14652 356 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 RPS4Y1P22090 263 aaKnown RBP8.08□□□□□ -1.12
FN1-227ENST00000498719 DLSTP36957 453 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 ALDH3B1P43353 468 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 INPP1P49441 399 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 SNRPD2P62316 118 aaKnown RBP8.08□□□□□ -1.12
FN1-227ENST00000498719 SLC25A35Q3KQZ1 300 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 ALKBH6Q3KRA9 238 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 EIPR1Q53HC9 387 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 YRDCQ86U90 279 aaKnown RBP8.08□□□□□ -1.12
FN1-227ENST00000498719 SAMD12Q8N8I0 201 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 DUSP18Q8NEJ0 188 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 OR4N2Q8NGD1 307 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 OR5J2Q8NH18 312 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 NDEL1Q9GZM8 345 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 LMAN1LQ9HAT1 526 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 KLHL1Q9NR64 748 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 HIF1ANQ9NWT6 349 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 ABI3Q9P2A4 366 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 UBQLN2Q9UHD9 624 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 PILRAQ9UKJ1 303 aa8.08□□□□□ -1.12
FN1-227ENST00000498719 TMEM184BQ9Y519 407 aaPredicted RBP8.08□□□□□ -1.12
FN1-227ENST00000498719 SDK1Q7Z5N4 2213 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 ARID1BQ8NFD5 2236 aaPredicted RBP8.07□□□□□ -1.12
FN1-227ENST00000498719 LRRN3E7EW58 273 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 SCO2O43819 266 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 DBIP07108 87 aaKnown RBP8.07□□□□□ -1.12
FN1-227ENST00000498719 STAG3L2P0CL84 134 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 HLA-DMAP28067 261 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 MAGEB1P43366 347 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 CBX5P45973 191 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 SRP9P49458 86 aaKnown RBP8.07□□□□□ -1.12
FN1-227ENST00000498719 EMDP50402 254 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 CLDN20P56880 219 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 SKP1P63208 163 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 ZNF85Q03923 595 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 SGCAQ16586 387 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 DEFB110Q30KQ9 67 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 PDLIM3Q53GG5 364 aaPredicted RBP8.07□□□□□ -1.12
FN1-227ENST00000498719 ZNF542PQ5EBM4 170 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 RNASE12Q5GAN4 147 aaKnown RBP8.07□□□□□ -1.12
FN1-227ENST00000498719 ANKRD54Q6NXT1 300 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 NDUFAF7Q7L592 441 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 BMP8AQ7Z5Y6 402 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 CEACAM19Q7Z692 300 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 TNFRSF14Q92956 283 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 ZC3HAV1LQ96H79 300 aaKnown RBP8.07□□□□□ -1.12
FN1-227ENST00000498719 TNFRSF13CQ96RJ3 184 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 LRRN3Q9H3W5 708 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 FN3KRPQ9HA64 309 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 ADGRL4Q9HBW9 690 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 KRCC1Q9NPI7 259 aaPredicted RBP8.07□□□□□ -1.12
FN1-227ENST00000498719 TRIM36Q9NQ86 728 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 CMC2Q9NRP2 79 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 FLRT3Q9NZU0 649 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 YBX2Q9Y2T7 364 aaKnown RBP8.07□□□□□ -1.12
FN1-227ENST00000498719 A0A0U1RQV5 110 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 A0A1W2PRG6 482 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 EPOPA6NHQ4 379 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 TEX46H3BTG2 121 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 SGK494L7N484 410 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 IMPA2O14732 288 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 KLF8O95600 359 aaPredicted RBP8.07□□□□□ -1.12
FN1-227ENST00000498719 EGFP01133 1207 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 ATP1B1P05026 303 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 ARSBP15848 533 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 PYCR1P32322 319 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 THBS4P35443 961 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 NFATC4Q14934 902 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 KIR2DS3Q14952 304 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 AMZ1Q400G9 498 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 GXYLT1Q4G148 440 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 YIF1BQ5BJH7 314 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 HBMQ6B0K9 141 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 THOC7Q6I9Y2 204 aaKnown RBP8.07□□□□□ -1.12
FN1-227ENST00000498719 SFXN4Q6P4A7 337 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 SHISA2Q6UWI4 295 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 SEM1Q6ZVN7 128 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 ABHD13Q7L211 337 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 TIGD4Q8IY51 512 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 GPR135Q8IZ08 494 aa8.07□□□□□ -1.12
FN1-227ENST00000498719 GPR137CQ8N3F9 429 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms