RNA–Protein interactions for RNA: ENST00000498189.1

BBS9-215, Transcript of Bardet-Biedl syndrome 9, human

TSL 2

Gene BBS9, Length 614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-215	ENST00000498189	HIST1H2AB	P04908	130 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	SOD3	P08294	240 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	ITGA5	P08648	1049 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	NQO1	P15559	274 aa	Known RBP	6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	GPX2	P18283	190 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	CCNA2	P20248	432 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	MAPK3	P27361	379 aa	Predicted RBP	6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	IL12A	P29459	219 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	HTR2B	P41595	481 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	ACAA2	P42765	397 aa	Known RBP	6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	CDKN2C	P42773	168 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	PPOX	P50336	477 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	ZNF83	P51522	516 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	RGS8	P57771	180 aa	Predicted RBP	6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	VLDLR	P98155	873 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	EFNB3	Q15768	340 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	NPTX1	Q15818	432 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	CHRFAM7A	Q494W8	412 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	TTMP	Q5BVD1	217 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	FAM76B	Q5HYJ3	339 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	COQ5	Q5HYK3	327 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	TSPO2	Q5TGU0	170 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	CYB5R2	Q6BCY4	276 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	WDR73	Q6P4I2	378 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	ZNF836	Q6ZNA1	936 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	IDO2	Q6ZQW0	420 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	DNM1P46	Q6ZS02	220 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	HIST3H2A	Q7L7L0	130 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	KRT74	Q7RTS7	529 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	PXK	Q7Z7A4	578 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	ARMC8	Q8IUR7	673 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	CROCCP3	Q8IVE0	287 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	CCDC103	Q8IW40	242 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	SLC38A6	Q8IZM9	456 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	CLEC4F	Q8N1N0	589 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	TMEM99	Q8N816	258 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	OR10H5	Q8NGA6	315 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	OR56B2P	Q8NGI1	322 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	OR1K1	Q8NGR3	316 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	PNPT1	Q8TCS8	783 aa	Known RBP	6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	HIST1H2AC	Q93077	130 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	C3orf49	Q96BT1	292 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	ZG16B	Q96DA0	208 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	AURKB	Q96GD4	344 aa	Predicted RBP	6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	TEX37	Q96LM6	180 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	MAGEB18	Q96M61	343 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	ZNF570	Q96NI8	536 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	TNFRSF13C	Q96RJ3	184 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	JMJD8	Q96S16	334 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	CACNG6	Q9BXT2	260 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	OR11A1	Q9GZK7	315 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	PAIP1	Q9H074	479 aa	Known RBP	6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	LRMDA	Q9H2I8	198 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	MS4A5	Q9H3V2	200 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	SLC7A10	Q9NS82	523 aa		6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	6.07	□□□□□ -1.44
BBS9-215	ENST00000498189	MTOR	P42345	2549 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189		A0A087WUJ7	227 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	CENPVL1	A0A0U1RR11	272 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	BBIP1	A8MTZ0	92 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189		C9JVG2	144 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	BET1	O15155	118 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	GMNN	O75496	209 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	ATP6V1G2	O95670	118 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	CLPTM1	O96005	669 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	IGKV3-15	P01624	115 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	MT-ND5	P03915	603 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	GLA	P06280	429 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	SELL	P14151	372 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	ANPEP	P15144	967 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	CBR1	P16152	277 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	USF1	P22415	310 aa	Predicted RBP	6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	SERPINF1	P36955	418 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	MVD	P53602	400 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	AANAT	Q16613	207 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	CYP51A1	Q16850	503 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	TRMT5	Q32P41	509 aa	Known RBP	6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	TBRG1	Q3YBR2	411 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	SLC9B1	Q4ZJI4	515 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	C11orf71	Q6IPW1	123 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	NIPAL3	Q6P499	406 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	SHQ1	Q6PI26	577 aa	Known RBP	6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	TTC33	Q6PID6	262 aa	Predicted RBP	6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	TRPM8	Q7Z2W7	1104 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	SLC46A3	Q7Z3Q1	461 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	PIWIL3	Q7Z3Z3	882 aa	Known RBP	6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	SERPINA11	Q86U17	422 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	VRK2	Q86Y07	508 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	HIPK1	Q86Z02	1210 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	DPP10	Q8N608	796 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	PCYOX1L	Q8NBM8	494 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	OR1J2	Q8NGS2	313 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	TMEM158	Q8WZ71	300 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	CHCHD6	Q9BRQ6	235 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	WAC	Q9BTA9	647 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	C6orf62	Q9GZU0	229 aa	Predicted RBP	6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	KCNN2	Q9H2S1	579 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	GHITM	Q9H3K2	345 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	GORASP2	Q9H8Y8	452 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	RPRD1B	Q9NQG5	326 aa	Known RBP	6.06	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms