RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 TGFBR3Q03167 851 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 GLO1Q04760 184 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 IL18R1Q13478 541 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 APOFQ13790 326 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 P2RY6Q15077 328 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 SFRP5Q5T4F7 317 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 OTPQ5XKR4 325 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 LYPD4Q6UWN0 246 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 STAC2Q6ZMT1 411 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 GID4Q8IVV7 300 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 ZNF433Q8N7K0 673 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-227ENST00000498056 RNASE6Q93091 150 aaKnown RBP11.92□□□□□ -0.5
CPNE1-227ENST00000498056 MUS81Q96NY9 551 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 NMNAT2Q9BZQ4 307 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 TMEM38BQ9NVV0 291 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 ELOVL5Q9NYP7 299 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 ZNF226Q9NYT6 803 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 AASSQ9UDR5 926 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 B9D1Q9UPM9 204 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 COA3Q9Y2R0 106 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-227ENST00000498056 UGT2A1Q9Y4X1 527 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 PRR14LQ5THK1 2151 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 HEATR1Q9H583 2144 aaKnown RBP11.92□□□□□ -0.5
CPNE1-227ENST00000498056 TVP23AA6NH52 213 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 PRODHO43272 600 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 MPZL2O60487 215 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 FARS2O95363 451 aaKnown RBP11.91□□□□□ -0.5
CPNE1-227ENST00000498056 GAAP10253 952 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 PSMB1P20618 241 aaKnown RBP11.91□□□□□ -0.5
CPNE1-227ENST00000498056 LAP3P28838 519 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 GUCA1AP43080 201 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-227ENST00000498056 SRSF1Q07955 248 aaKnown RBP eCLIP11.91□□□□□ -0.57e-8■□□□□ 9.2
CPNE1-227ENST00000498056 FAM27E3Q08E93 113 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 MAD2L1BPQ15013 274 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-227ENST00000498056 SGCAQ16586 387 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 HIKESHIQ53FT3 197 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 NXNL2Q5VZ03 156 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 ZBTB46Q86UZ6 589 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 GLB1L2Q8IW92 636 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 C1orf162Q8NEQ5 155 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-227ENST00000498056 OR10H5Q8NGA6 315 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 CNIH3Q8TBE1 160 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 ZNRF4Q8WWF5 429 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 TFAP2CQ92754 450 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 UBE2FQ969M7 185 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 S100PBPQ96BU1 408 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 ZMYND19Q96E35 227 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-227ENST00000498056 CNBD2Q96M20 576 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 DDOQ99489 341 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 ACTR6Q9GZN1 396 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 NELFAQ9H3P2 528 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 Q9H521 79 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 EMC7Q9NPA0 242 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 POLE4Q9NR33 117 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 H2AFY2Q9P0M6 372 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-227ENST00000498056 COMMD3-BMI1R4GMX3 469 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 USP9XQ93008 2570 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-227ENST00000498056 DOPEY1Q5JWR5 2465 aa11.91□□□□□ -0.5
CPNE1-227ENST00000498056 A0A1W2PR80 420 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 SH3D21A4FU49 640 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 CCDC182A6NF36 153 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 C16orf97H3BN30 126 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 MPZL1O95297 269 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 MRPL3P09001 348 aaKnown RBP11.9□□□□□ -0.5
CPNE1-227ENST00000498056 MSR1P21757 451 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 SLC2A5P22732 501 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 UGT2B10P36537 528 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 NAA10P41227 235 aaPredicted RBP11.9□□□□□ -0.5
CPNE1-227ENST00000498056 NUDT6P53370 316 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 UBE2NP61088 152 aaKnown RBP11.9□□□□□ -0.5
CPNE1-227ENST00000498056 SNRPGP62308 76 aaKnown RBP11.9□□□□□ -0.5
CPNE1-227ENST00000498056 TUBA1BP68363 451 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 TUBA4AP68366 448 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 ADAM8P78325 824 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 MRPS34P82930 218 aaKnown RBP11.9□□□□□ -0.5
CPNE1-227ENST00000498056 MEP1BQ16820 701 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 TBRG1Q3YBR2 411 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 FBXL19-AS1Q494R0 122 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 AADACL4Q5VUY2 407 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 ALKBH2Q6NS38 261 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 ANKRD16Q6P6B7 361 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 TUBA1AQ71U36 451 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 ERI1Q8IV48 349 aaKnown RBP11.9□□□□□ -0.5
CPNE1-227ENST00000498056 LRRC18Q8N456 261 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 SLC22A24Q8N4F4 322 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 STEAP2Q8NFT2 490 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 TRUB1Q8WWH5 349 aaKnown RBP11.9□□□□□ -0.5
CPNE1-227ENST00000498056 NANOS1Q8WY41 292 aaKnown RBP11.9□□□□□ -0.5
CPNE1-227ENST00000498056 NABP1Q96AH0 204 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 ZNF582Q96NG8 517 aaPredicted RBP11.9□□□□□ -0.5
CPNE1-227ENST00000498056 SH3GL3Q99963 347 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 ANKRD60Q9BZ19 345 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 CLN6Q9NWW5 311 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 RAB26Q9ULW5 256 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 FLNCQ14315 2725 aa11.9□□□□□ -0.5
CPNE1-227ENST00000498056 SLC22A31A6NKX4 558 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 ENTPD6O75354 484 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 GLCEO94923 617 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 SPARCP09486 303 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 OR8G3PP0DMU2 310 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms