RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 ADAM18Q9Y3Q7 739 aa9.97□□□□□ -0.81
HLA-B-254ENST00000497377 CSMD1Q96PZ7 3565 aa9.96□□□□□ -0.81
HLA-B-254ENST00000497377 PRSS37A4D1T9 235 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 ARRDC5A6NEK1 342 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 E7EQL1 145 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 ARPC3O15145 178 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 RAB36O95755 333 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 PTHP01270 115 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 HLA-HP01893 362 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 DANCRP0C864 163 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 PAX1P15863 534 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 ZNF14P17017 642 aaPredicted RBP9.96□□□□□ -0.82
HLA-B-254ENST00000497377 IDH3GP51553 393 aaPredicted RBP9.96□□□□□ -0.82
HLA-B-254ENST00000497377 FXYD6P3P58550 94 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 RAB1AP62820 205 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 SPOCK1Q08629 439 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 NPRL3Q12980 569 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 KRR1Q13601 381 aaKnown RBP9.96□□□□□ -0.82
HLA-B-254ENST00000497377 MICAQ29983 383 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 PGGHGQ32M88 737 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 RFX4Q33E94 735 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 MESTQ5EB52 335 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 AGAP6Q5VW22 663 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 ZNF770Q6IQ21 691 aaPredicted RBP9.96□□□□□ -0.82
HLA-B-254ENST00000497377 TMEM53Q6P2H8 277 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 ZNF620Q6ZNG0 422 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 SLC16A14Q7RTX9 510 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 DTX2Q86UW9 622 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 SKA3Q8IX90 412 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 FBXL14Q8N1E6 418 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 PAPD5Q8NDF8 572 aaKnown RBP9.96□□□□□ -0.82
HLA-B-254ENST00000497377 OR52L1Q8NGH7 329 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 NEUROG1Q92886 237 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 SNX18Q96RF0 628 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 WACQ9BTA9 647 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 GSX2Q9BZM3 304 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 OR52D1Q9H346 318 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 C1orf198Q9H425 327 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 ZNF701Q9NV72 531 aaPredicted RBP9.96□□□□□ -0.82
HLA-B-254ENST00000497377 ZNF224Q9NZL3 707 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 IER3IP1Q9Y5U9 82 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 ATP23Q9Y6H3 246 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 AKAP9Q99996 3911 aa9.96□□□□□ -0.82
HLA-B-254ENST00000497377 PRRC2AP48634 2157 aaKnown RBP9.95□□□□□ -0.82
HLA-B-254ENST00000497377 ARID1AO14497 2285 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 TEX13CA0A0J9YWL9 993 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 SLC22A23A1A5C7 686 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 ZNF503-AS2A6NEH8 195 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 VSTM5A8MXK1 200 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 ATP6V1G2-DDX39BF2Z307 99 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 GNGT2O14610 69 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 SLC2A10O95528 541 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 SERPINA5P05154 406 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 GSTM3P21266 225 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 APOBEC3AP31941 199 aaPredicted RBP9.95□□□□□ -0.82
HLA-B-254ENST00000497377 TTKP33981 857 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 PTDSS1P48651 473 aaKnown RBP9.95□□□□□ -0.82
HLA-B-254ENST00000497377 FABP6P51161 128 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 FMODQ06828 376 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 PIGFQ07326 219 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 COX10Q12887 443 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 FAM27BQ5VT28 67 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 SHEQ5VZ18 495 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 PRSS57Q6UWY2 283 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 RASSF6Q6ZTQ3 369 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 CCDC121Q6ZUS5 278 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 FOXL2NBQ6ZUU3 175 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 CLDN22Q8N7P3 220 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 AQP11Q8NBQ7 271 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 NUP37Q8NFH4 326 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 OR9Q2Q8NGE9 314 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 NSMAFQ92636 917 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 ZNF75AQ96N20 296 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 ERMAPQ96PL5 475 aaPredicted RBP9.95□□□□□ -0.82
HLA-B-254ENST00000497377 SH3GL3Q99963 347 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 DGCR6LQ9BY27 220 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 RNF121Q9H920 327 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 IL20Q9NYY1 176 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 VSX1Q9NZR4 365 aaPredicted RBP9.95□□□□□ -0.82
HLA-B-254ENST00000497377 LAMP3Q9UQV4 416 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 SPEF1Q9Y4P9 236 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 UGT2A1Q9Y4X1 527 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 CDH10Q9Y6N8 788 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 U3KQV3 271 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 CELSR1Q9NYQ6 3014 aa9.95□□□□□ -0.82
HLA-B-254ENST00000497377 IGKV1D-43A0A0B4J1Z2 117 aa9.94□□□□□ -0.82
HLA-B-254ENST00000497377 IGHV2OR16-5A0A0B4J2B6 119 aa9.94□□□□□ -0.82
HLA-B-254ENST00000497377 OVOL3O00110 214 aa9.94□□□□□ -0.82
HLA-B-254ENST00000497377 EBAG9O00559 213 aa9.94□□□□□ -0.82
HLA-B-254ENST00000497377 SOCS2O14508 198 aa9.94□□□□□ -0.82
HLA-B-254ENST00000497377 FKBP6O75344 327 aa9.94□□□□□ -0.82
HLA-B-254ENST00000497377 PPP1R3DO95685 299 aa9.94□□□□□ -0.82
HLA-B-254ENST00000497377 GASTP01350 101 aa9.94□□□□□ -0.82
HLA-B-254ENST00000497377 SOD3P08294 240 aa9.94□□□□□ -0.82
HLA-B-254ENST00000497377 BMP4P12644 408 aa9.94□□□□□ -0.82
HLA-B-254ENST00000497377 NOS3P29474 1203 aa9.94□□□□□ -0.82
HLA-B-254ENST00000497377 CRABP1P29762 137 aa9.94□□□□□ -0.82
HLA-B-254ENST00000497377 CDAP32320 146 aa9.94□□□□□ -0.82
HLA-B-254ENST00000497377 GIPRP48546 466 aa9.94□□□□□ -0.82
HLA-B-254ENST00000497377 PCBD1P61457 104 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms