RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 STRADAQ7RTN6 431 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 OAFQ86UD1 273 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 HSD17B11Q8NBQ5 300 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 ZNF502Q8TBZ5 544 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 SERPINB12Q96P63 405 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 GSDMAQ96QA5 445 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 C11orf70Q9BRQ4 267 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 HDHD3Q9BSH5 251 aaPredicted RBP2.65□□□□□ -1.99
SMC4-225ENST00000497203 ANP32EQ9BTT0 268 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 MRPL37Q9BZE1 423 aaKnown RBP2.65□□□□□ -1.99
SMC4-225ENST00000497203 SLCO1B3Q9NPD5 702 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 HRASLS2Q9NWW9 162 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 LYARQ9NX58 379 aaKnown RBP2.65□□□□□ -1.99
SMC4-225ENST00000497203 KIAA1257Q9ULG3 409 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 VANGL2Q9ULK5 521 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 CAB39Q9Y376 341 aaPredicted RBP2.65□□□□□ -1.99
SMC4-225ENST00000497203 MTCL1Q9Y4B5 1905 aaKnown RBP2.65□□□□□ -1.99
SMC4-225ENST00000497203 PIKFYVEQ9Y2I7 2098 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 NFASCO94856 1347 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 MAPK8IP3Q9UPT6 1336 aa2.65□□□□□ -1.99
SMC4-225ENST00000497203 CARMIL3Q8ND23 1372 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 IGLV11-55A0A075B6I3 123 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 ZNF816-ZNF321PA0A0X1KG74 233 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 LYRM9A8MSI8 78 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 HIDE1A8MVS5 230 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 CACNG3O60359 315 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 SS18L1O75177 396 aaPredicted RBP2.64□□□□□ -1.99
SMC4-225ENST00000497203 OR2F2O95006 317 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 FGFR1OPO95684 399 aaKnown RBP2.64□□□□□ -1.99
SMC4-225ENST00000497203 RETP07949 1114 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 MYL2P10916 166 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 SFTPCP11686 197 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 HOXA9P31269 272 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 HRH1P35367 487 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 CXCL5P42830 114 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 CDKN1BP46527 198 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 UBE2AP49459 152 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 MNAT1P51948 309 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 HERVK_113P61574 105 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 NUTF2P61970 127 aaKnown RBP2.64□□□□□ -1.99
SMC4-225ENST00000497203 SLC7A9P82251 487 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 PAX5Q02548 391 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 LY6G6FQ5SQ64 297 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 ANKRD22Q5VYY1 191 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 LYPD2Q6UXB3 125 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 ZNF493Q6ZR52 646 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 EIF3MQ7L2H7 374 aaKnown RBP2.64□□□□□ -1.99
SMC4-225ENST00000497203 HDDC2Q7Z4H3 204 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 BIVMQ86UB2 503 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 DUSP18Q8NEJ0 188 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 CCDC148Q8NFR7 591 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 OR4S2Q8NH73 311 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 TMEM158Q8WZ71 300 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 FAM3DQ96BQ1 224 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 DNAJC1Q96KC8 554 aaKnown RBP2.64□□□□□ -1.99
SMC4-225ENST00000497203 PANX1Q96RD7 426 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 TAAR1Q96RJ0 339 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 PARP12Q9H0J9 701 aaKnown RBP2.64□□□□□ -1.99
SMC4-225ENST00000497203 CDC42EP4Q9H3Q1 356 aaKnown RBP2.64□□□□□ -1.99
SMC4-225ENST00000497203 GEMIN7Q9H840 131 aaKnown RBP2.64□□□□□ -1.99
SMC4-225ENST00000497203 TMEM165Q9HC07 324 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 ZNF629Q9UEG4 869 aaPredicted RBP2.64□□□□□ -1.99
SMC4-225ENST00000497203 LGALS13Q9UHV8 139 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 CD84Q9UIB8 345 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 F11RQ9Y624 299 aaKnown RBP2.64□□□□□ -1.99
SMC4-225ENST00000497203 TET2Q6N021 2002 aaPredicted RBP2.64□□□□□ -1.99
SMC4-225ENST00000497203 MAP3K15Q6ZN16 1313 aa2.64□□□□□ -1.99
SMC4-225ENST00000497203 TRBV9A0A0B4J1U6 114 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 PLAC8L1A1L4L8 177 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 KMOO15229 486 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 CHST1O43916 411 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 KLHL41O60662 606 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 HUS1O60921 280 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 ICOSLGO75144 302 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 UTS2O95399 124 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 SERPINA5P05154 406 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 ANXA8P13928 327 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 FOLR1P15328 257 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 ZNF250P15622 560 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 F2RP25116 425 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 GTF2E2P29084 291 aaKnown RBP2.63□□□□□ -1.99
SMC4-225ENST00000497203 HMOX2P30519 316 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 MRPL19P49406 292 aaKnown RBP2.63□□□□□ -1.99
SMC4-225ENST00000497203 CYB561P49447 251 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 RAB9AP51151 201 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 NCBP2P52298 156 aaKnown RBP eCLIP2.63□□□□□ -1.99
SMC4-225ENST00000497203 CRISP3P54108 245 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 LIPEQ05469 1076 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 PON3Q15166 354 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 MRPL23Q16540 153 aaKnown RBP2.63□□□□□ -1.99
SMC4-225ENST00000497203 PGGHGQ32M88 737 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 ALKBH6Q3KRA9 238 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 THEM4Q5T1C6 240 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 ANXA8L1Q5VT79 327 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 TEX43Q6ZNM6 134 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 LINC00173Q6ZV60 143 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 GABRG1Q8N1C3 465 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 BBOF1Q8ND07 529 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 OR2A1Q8NGT9 310 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 GIMAP1Q8WWP7 306 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms