RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 FAM172BPA6NC97 362 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 TRABD2BA6NFA1 517 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 LAMTOR5O43504 91 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 DHFRP00374 187 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 MAS1P04201 325 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 FBXO45P0C2W1 286 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 IFNGR1P15260 489 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 GDNFP39905 211 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 RIDAP52758 137 aaKnown RBP11.71□□□□□ -0.53
GARNL3-220ENST00000496711 SCAND1P57086 179 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 POU3F1Q03052 451 aaPredicted RBP11.71□□□□□ -0.53
GARNL3-220ENST00000496711 DYRK1AQ13627 763 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 IL11RAQ14626 422 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 SF3B4Q15427 424 aaKnown RBP eCLIP11.71□□□□□ -0.53
GARNL3-220ENST00000496711 PLPPR5Q32ZL2 321 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 PRSS45Q7RTY3 260 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 DNAAF1Q8NEP3 725 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 OR10G3Q8NGC4 313 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 SYNPRQ8TBG9 265 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 MCHR2Q969V1 340 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 MIB2Q96AX9 1013 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 S100A16Q96FQ6 103 aaKnown RBP11.71□□□□□ -0.53
GARNL3-220ENST00000496711 C5orf34Q96MH7 638 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 KCNK17Q96T54 332 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 ABHD6Q9BV23 337 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 POTEKPQ9BYX7 375 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 NUDT15Q9NV35 164 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 MCUBQ9NWR8 336 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 ING3Q9NXR8 418 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 EML6Q6ZMW3 1958 aa11.71□□□□□ -0.54
GARNL3-220ENST00000496711 LIPT2A6NK58 231 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 SHISA8B8ZZ34 492 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 H3BML4 177 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 GABARAPH6UMI1 98 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 TCRBP04435 133 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 PTGS2P35354 604 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 ART1P52961 327 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 HSF1Q00613 529 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 FMODQ06828 376 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 BCL2A1Q16548 175 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 TMEM69Q5SWH9 247 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 BCL2L15Q5TBC7 163 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 SLC22A10Q63ZE4 541 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 OR7E24Q6IFN5 339 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 DND1Q8IYX4 353 aaKnown RBP11.7□□□□□ -0.54
GARNL3-220ENST00000496711 SLC26A10Q8NG04 563 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 HAVCR1Q96D42 359 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 SPACA9Q96E40 222 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-220ENST00000496711 DEFB126Q9BYW3 111 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 GPN3Q9UHW5 284 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-220ENST00000496711 GTF2A1LQ9UNN4 478 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 FOXJ3Q9UPW0 622 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 LRP12Q9Y561 859 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 TRAV6A0A075B6T7 132 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 A0A1W2PNV4 684 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 C7orf66A4D0T2 115 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 H3BSH0 61 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 SULT1B1O43704 296 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 CER1O95813 267 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 WNT11O96014 354 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 ZNF823P16415 610 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 GIFP27352 417 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 CFPP27918 469 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 MRPS10P82664 201 aaKnown RBP11.7□□□□□ -0.54
GARNL3-220ENST00000496711 MFGE8Q08431 387 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-220ENST00000496711 CDK10Q15131 360 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 STPG1Q5TH74 334 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 RASL10BQ96S79 203 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 AKIRIN1Q9H9L7 192 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-220ENST00000496711 FANCFQ9NPI8 374 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 KLHL9Q9P2J3 617 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 STEAP1Q9UHE8 339 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 B3GALT5Q9Y2C3 310 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 B3GALT1Q9Y5Z6 326 aa11.7□□□□□ -0.54
GARNL3-220ENST00000496711 LOC102723996A0A087X1L8 192 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 A0A0A6YYJ9 748 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 PATE3B3GLJ2 98 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 FAM47E-STBD1D6RA91 191 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 KRT33AO76009 404 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 DKK1O94907 266 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 MPZL1O95297 269 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 ECDO95905 644 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-220ENST00000496711 PNPP00491 289 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 MT-ND4P03905 459 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 GSTT2P0CG29 244 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 GSTT2BP0CG30 244 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 MNDAP41218 407 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 PTH2RP49190 550 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 DUSP3P51452 185 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-220ENST00000496711 TRA2AQ13595 282 aaKnown RBP eCLIP11.69□□□□□ -0.54
GARNL3-220ENST00000496711 PCOLCEQ15113 449 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 BTBD16Q32M84 506 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 C3orf33Q6P1S2 294 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 MTFR2Q6P444 385 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 CATSPERDQ86XM0 798 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 SERPINA12Q8IW75 414 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 BMPERQ8N8U9 685 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 POC1BQ8TC44 478 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 ELP5Q8TE02 316 aa11.69□□□□□ -0.54
GARNL3-220ENST00000496711 C15orf40Q8WUR7 153 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms