RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 NAAAQ02083 359 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 CCNIQ14094 377 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 RAB39AQ14964 217 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 DEFB113Q30KQ7 82 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 C1QTNF12Q5T7M4 302 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 OTPQ5XKR4 325 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 TMEM53Q6P2H8 277 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 VHLLQ6RSH7 139 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 ASRGL1Q7L266 308 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 ZNF627Q7L945 461 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.54□□□□□ -1.04
CALD1-223ENST00000496024 JAZF1Q86VZ6 243 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 CCDC36Q8IYA8 594 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 ZNF611Q8N823 705 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 PAPD5Q8NDF8 572 aaKnown RBP8.54□□□□□ -1.04
CALD1-223ENST00000496024 OR52L1Q8NGH7 329 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 OR4K13Q8NH42 304 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 FNDC8Q8TC99 324 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 SMAP2Q8WU79 429 aaPredicted RBP8.54□□□□□ -1.04
CALD1-223ENST00000496024 UTP4Q969X6 686 aaKnown RBP8.54□□□□□ -1.04
CALD1-223ENST00000496024 TSSK2Q96PF2 358 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 GPX7Q96SL4 187 aaPredicted RBP8.54□□□□□ -1.04
CALD1-223ENST00000496024 FEVQ99581 238 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 PLA2G12AQ9BZM1 189 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 SYT4Q9H2B2 425 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 KCNN2Q9H2S1 579 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 SMURF2Q9HAU4 748 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 CRNNQ9UBG3 495 aaPredicted RBP8.54□□□□□ -1.04
CALD1-223ENST00000496024 DNAJB9Q9UBS3 223 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 CDH10Q9Y6N8 788 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 VPS13CQ709C8 3753 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 SMPD2O60906 423 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 DEAF1O75398 565 aaPredicted RBP8.53□□□□□ -1.04
CALD1-223ENST00000496024 TXNDC12O95881 172 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 IGLV1-44P01699 117 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 SOD3P08294 240 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 HIST1H1CP16403 213 aaKnown RBP8.53□□□□□ -1.04
CALD1-223ENST00000496024 CTLA4P16410 223 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 HOXB6P17509 224 aaKnown RBP8.53□□□□□ -1.04
CALD1-223ENST00000496024 NPR2P20594 1047 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 PAX7P23759 505 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 LAP3P28838 519 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 CDKN1AP38936 164 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 ZNF133P52736 654 aaPredicted RBP8.53□□□□□ -1.04
CALD1-223ENST00000496024 MRPS34P82930 218 aaKnown RBP8.53□□□□□ -1.04
CALD1-223ENST00000496024 HSF2Q03933 536 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 SLC36A2Q495M3 483 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 LEG1Q6P5S2 330 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 RASSF6Q6ZTQ3 369 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 AMIGO2Q86SJ2 522 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 SDR9C7Q8NEX9 313 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 OR52E2Q8NGJ4 325 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 OR8D4Q8NGM9 314 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 TMEM171Q8WVE6 324 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 PIGTQ969N2 578 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 NABP1Q96AH0 204 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 PERPQ96FX8 193 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 NMNAT3Q96T66 252 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 NIPSNAP1Q9BPW8 284 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 TSSK6Q9BXA6 273 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 DGCR6LQ9BY27 220 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 NUAK2Q9H093 628 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 FN3KQ9H479 309 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 SIAEQ9HAT2 523 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 MOV10Q9HCE1 1003 aaKnown RBP8.53□□□□□ -1.04
CALD1-223ENST00000496024 SRA1Q9HD15 236 aaKnown RBP8.53□□□□□ -1.04
CALD1-223ENST00000496024 EMC7Q9NPA0 242 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 CCNB1IP1Q9NPC3 277 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 ARMC1Q9NVT9 282 aa8.53□□□□□ -1.04
CALD1-223ENST00000496024 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.53□□□□□ -1.04
CALD1-223ENST00000496024 COA3Q9Y2R0 106 aaPredicted RBP8.53□□□□□ -1.04
CALD1-223ENST00000496024 CELSR1Q9NYQ6 3014 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 IGHV2OR16-5A0A0B4J2B6 119 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 FAM171A2A8MVW0 826 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 H3BN98 237 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 DCTN6O00399 190 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 AHCYL1O43865 530 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 KHDRBS3O75525 346 aaKnown RBP8.52□□□□□ -1.05
CALD1-223ENST00000496024 MPZL1O95297 269 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 GPANK1O95872 356 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 RENP00797 406 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 SCG5P05408 212 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 DANCRP0C864 163 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 CCL2P13500 99 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 APEHP13798 732 aaKnown RBP8.52□□□□□ -1.05
CALD1-223ENST00000496024 ZNF14P17017 642 aaPredicted RBP8.52□□□□□ -1.05
CALD1-223ENST00000496024 ZNF32P17041 273 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 GSTM3P21266 225 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 MSR1P21757 451 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 POU1F1P28069 291 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 HGFACQ04756 655 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 PLP2Q04941 152 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.52□□□□□ -1.05
CALD1-223ENST00000496024 PGGHGQ32M88 737 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 C3orf36Q3SXR2 165 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 PABPC1L2AQ5JQF8 200 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 KRT80Q6KB66 452 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 RPL13AP3Q6NVV1 102 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 UGT2A3Q6UWM9 527 aa8.52□□□□□ -1.05
CALD1-223ENST00000496024 ADCK1Q86TW2 530 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms