RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 POU2F3Q9UKI9 436 aa10.55□□□□□ -0.72
CSNK1E-213ENST00000495232 FBXL3Q9UKT7 428 aa10.55□□□□□ -0.72
CSNK1E-213ENST00000495232 HRNRQ86YZ3 2850 aaPredicted RBP10.55□□□□□ -0.72
CSNK1E-213ENST00000495232 BHLHE40O14503 412 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 KHDRBS3O75525 346 aaKnown RBP10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 CRYAAP02489 173 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 OSMP13725 252 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 CDKN2AP42771 156 aaKnown RBP10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 IDH3GP51553 393 aaPredicted RBP10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 MRPS34P82930 218 aaKnown RBP10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 C3orf36Q3SXR2 165 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 ADAM5Q6NVV9 412 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 SLC27A4Q6P1M0 643 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 SEZ6L2Q6UXD5 910 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 PTCHD4Q6ZW05 846 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 FAM169BQ8N8A8 192 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 SDR9C7Q8NEX9 313 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 NMD3Q96D46 503 aaKnown RBP10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 SNX18Q96RF0 628 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 NMNAT3Q96T66 252 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 NUAK2Q9H093 628 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 SRA1Q9HD15 236 aaKnown RBP10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 PAPOLBQ9NRJ5 636 aaKnown RBP10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 KRT84Q9NSB2 600 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 KLHL21Q9UJP4 597 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 ABCA12Q86UK0 2595 aa10.54□□□□□ -0.72
CSNK1E-213ENST00000495232 IGKV1D-43A0A0B4J1Z2 117 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 IGHV1-18A0A0C4DH31 117 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 RIIAD1A6NNX1 92 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 PLAUP00749 431 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 PTHP01270 115 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 IGKV3-15P01624 115 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 IGFBP1P08833 259 aaPredicted RBP10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 CTLA4P16410 223 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 ZNF3P17036 446 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 MSR1P21757 451 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 LOXP28300 417 aaPredicted RBP10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 LAP3P28838 519 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 GIPRP48546 466 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 PCBD1P61457 104 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 PLP2Q04941 152 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 KEAP1Q14145 624 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 GLB1L2Q8IW92 636 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 LNX2Q8N448 690 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 IL17RDQ8NFM7 739 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 OR8D4Q8NGM9 314 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 AKAP1Q92667 903 aaKnown RBP eCLIP10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 HTRA1Q92743 480 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 TMEM204Q9BSN7 226 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 PLEKHF2Q9H8W4 249 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 S100A14Q9HCY8 104 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 RPRD1BQ9NQG5 326 aaKnown RBP10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 B3GNT2Q9NY97 397 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 CRNNQ9UBG3 495 aaPredicted RBP10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 ENOPH1Q9UHY7 261 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 COA3Q9Y2R0 106 aaPredicted RBP10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 UGT2A1Q9Y4X1 527 aa10.53□□□□□ -0.72
CSNK1E-213ENST00000495232 PRR14LQ5THK1 2151 aa10.52□□□□□ -0.72
CSNK1E-213ENST00000495232 IQCMA0A1B0GVH7 501 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 ZNF503-AS2A6NEH8 195 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 ERICH4A6NGS2 130 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 SAC3D1A6NKF1 404 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 C12orf71A8MTZ7 269 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 HS3ST1O14792 307 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 BAG2O95816 211 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 IGLV1-44P01699 117 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 HLA-DQA2P01906 255 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 HMGN1P05114 100 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 CST2P09228 141 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 CECR9P0C854 216 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 PATE4P0C8F1 98 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 DNASE1P24855 282 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 GRK5P34947 590 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 DAPP51397 102 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 CDH11P55287 796 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 HSF2Q03933 536 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 GLO1Q04760 184 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 GINS1Q14691 196 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 ETFDHQ16134 617 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 PGGHGQ32M88 737 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 ZNF672Q499Z4 452 aaPredicted RBP10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 FAM27BQ5VT28 67 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 FAHD1Q6P587 224 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 C20orf204Q6ZNR8 217 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 CDH24Q86UP0 819 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 ALDH16A1Q8IZ83 802 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 KBTBD8Q8NFY9 601 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 OR4Q3Q8NH05 313 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 FBXW5Q969U6 566 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 NABP1Q96AH0 204 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 OTULINQ96BN8 352 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 PLEKHA8Q96JA3 519 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 FOXN4Q96NZ1 517 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 PKP2Q99959 881 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 WACQ9BTA9 647 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 OSBPL10Q9BXB5 764 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 C1orf198Q9H425 327 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 POLE4Q9NR33 117 aa10.52□□□□□ -0.73
CSNK1E-213ENST00000495232 FAIMQ9NVQ4 179 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms