RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 MRPS34P82930 218 aaKnown RBP18.81■□□□□ 0.6
HDDC3-203ENST00000494993 GLO1Q04760 184 aa18.81■□□□□ 0.6
HDDC3-203ENST00000494993 PABPC1L2AQ5JQF8 200 aa18.81■□□□□ 0.6
HDDC3-203ENST00000494993 ACSM5Q6NUN0 579 aa18.81■□□□□ 0.6
HDDC3-203ENST00000494993 C1orf229Q6ZS94 237 aaPredicted RBP18.81■□□□□ 0.6
HDDC3-203ENST00000494993 USP51Q70EK9 711 aa18.81■□□□□ 0.6
HDDC3-203ENST00000494993 CPEB3Q8NE35 698 aaKnown RBP18.81■□□□□ 0.6
HDDC3-203ENST00000494993 TMEM255BQ8WV15 326 aa18.81■□□□□ 0.6
HDDC3-203ENST00000494993 GTF3AQ92664 365 aaKnown RBP18.81■□□□□ 0.6
HDDC3-203ENST00000494993 RAB39BQ96DA2 213 aa18.81■□□□□ 0.6
HDDC3-203ENST00000494993 SGTBQ96EQ0 304 aa18.81■□□□□ 0.6
HDDC3-203ENST00000494993 KCNN2Q9H2S1 579 aa18.81■□□□□ 0.6
HDDC3-203ENST00000494993 SIAEQ9HAT2 523 aa18.81■□□□□ 0.6
HDDC3-203ENST00000494993 DECR2Q9NUI1 292 aa18.81■□□□□ 0.6
HDDC3-203ENST00000494993 TPD52L2O43399 206 aaKnown RBP18.8■□□□□ 0.6
HDDC3-203ENST00000494993 DEAF1O75398 565 aaPredicted RBP18.8■□□□□ 0.6
HDDC3-203ENST00000494993 MPZL1O95297 269 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 SLC2A10O95528 541 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 TSPAN19P0C672 248 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 TNFRSF1BP20333 461 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 CCNOP22674 350 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 TAS2R41P59536 307 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 ARMC4Q5T2S8 1044 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 TEX29Q8N6K0 151 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 TMEM239Q8WW34 195 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 NABP1Q96AH0 204 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 MAGEB18Q96M61 343 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 POLR2J2Q9GZM3 115 aaKnown RBP18.8■□□□□ 0.6
HDDC3-203ENST00000494993 POLR2J3Q9H1A7 115 aaKnown RBP18.8■□□□□ 0.6
HDDC3-203ENST00000494993 SAP30LQ9HAJ7 183 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 CCNB1IP1Q9NPC3 277 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 C20orf141Q9NUB4 165 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 STX18Q9P2W9 335 aaKnown RBP18.8■□□□□ 0.6
HDDC3-203ENST00000494993 UGT2A1Q9Y4X1 527 aa18.8■□□□□ 0.6
HDDC3-203ENST00000494993 LOC105371242A0A075B767 164 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 CLDN25C9JDP6 229 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 FBP2O00757 339 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 RGS9O75916 674 aaPredicted RBP18.79■□□□□ 0.6
HDDC3-203ENST00000494993 OR5F1O95221 314 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 AVPP01185 164 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 ZNF32P17041 273 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 EPHA1P21709 976 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 STOMP27105 288 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 CDAP32320 146 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 TSTQ16762 297 aaKnown RBP18.79■□□□□ 0.6
HDDC3-203ENST00000494993 NANOGP8Q6NSW7 305 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 MOSPD2Q8NHP6 518 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 LIPHQ8WWY8 451 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 NMD3Q96D46 503 aaKnown RBP18.79■□□□□ 0.6
HDDC3-203ENST00000494993 POM121L2Q96KW2 1035 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 SMURF2Q9HAU4 748 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 NPHS2Q9NP85 383 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 RIMS3Q9UJD0 308 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 BAG5Q9UL15 447 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 PCDHB10Q9UN67 800 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 WIPI2Q9Y4P8 454 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 CACNG2Q9Y698 323 aa18.79■□□□□ 0.6
HDDC3-203ENST00000494993 IGKV1D-43A0A0B4J1Z2 117 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 NPIPB13A6NJU9 1138 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 NPIPB4C9JG80 1138 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 PLPP2O43688 288 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 IGHV2-5P01817 119 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 ZNF81P51508 661 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 HILS1P60008 231 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 ACTG1P63261 375 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 FMODQ06828 376 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 PIN1Q13526 163 aaPredicted RBP18.78■□□□□ 0.6
HDDC3-203ENST00000494993 CYLC2Q14093 348 aaPredicted RBP18.78■□□□□ 0.6
HDDC3-203ENST00000494993 HFEQ30201 348 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 ZNF718Q3SXZ3 478 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 RABL3Q5HYI8 236 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 USP43Q70EL4 1123 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 CALHM3Q86XJ0 350 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 ZNF101Q8IZC7 436 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 HDAC2Q92769 488 aaKnown RBP18.78■□□□□ 0.6
HDDC3-203ENST00000494993 TMPRSS13Q9BYE2 586 aa18.78■□□□□ 0.6
HDDC3-203ENST00000494993 A0A0G2JMP0 313 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 A0A0X1KG70 313 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 SHOX2O60902 331 aaPredicted RBP18.77■□□□□ 0.6
HDDC3-203ENST00000494993 GCH1P30793 250 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 WNT5AP41221 380 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 CD47Q08722 323 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 SGCAQ16586 387 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 TMEM255AQ5JRV8 349 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 FAM209AQ5JX71 171 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 SPATA46Q5T0L3 261 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 OR4M2Q8NGB6 313 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 IPCEF1Q8WWN9 437 aaPredicted RBP18.77■□□□□ 0.6
HDDC3-203ENST00000494993 RAB1CQ92928 201 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 ELMOD3Q96FG2 381 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 MARS2Q96GW9 593 aaKnown RBP18.77■□□□□ 0.6
HDDC3-203ENST00000494993 TIMD4Q96H15 378 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 SH3GL1Q99961 368 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 ECSITQ9BQ95 431 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 SIKE1Q9BRV8 207 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 TXNIPQ9H3M7 391 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 EIF3KQ9UBQ5 218 aaKnown RBP18.77■□□□□ 0.6
HDDC3-203ENST00000494993 MED31Q9Y3C7 131 aa18.77■□□□□ 0.6
HDDC3-203ENST00000494993 LOC100509620A0A075B734 347 aa18.76■□□□□ 0.59
HDDC3-203ENST00000494993 A0A0G2JND7 137 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms