RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 IGHV2OR16-5A0A0B4J2B6 119 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 PRSS37A4D1T9 235 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 VSTM5A8MXK1 200 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 AHCYL1O43865 530 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 PPP1R3DO95685 299 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 BMP4P12644 408 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 HOXB6P17509 224 aaKnown RBP13.83□□□□□ -0.2
LIME1-209ENST00000494776 NOS3P29474 1203 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 GSSP48637 474 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 ADAM8P78325 824 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 MRPS34P82930 218 aaKnown RBP13.83□□□□□ -0.2
LIME1-209ENST00000494776 PLP2Q04941 152 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 Q5PR19 223 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 FAM122BQ7Z309 247 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 DTX2Q86UW9 622 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 TGIF2LYQ8IUE0 185 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 OR4C15Q8NGM1 316 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 FGFBP3Q8TAT2 258 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 IGFBPL1Q8WX77 278 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 NMD3Q96D46 503 aaKnown RBP13.83□□□□□ -0.2
LIME1-209ENST00000494776 SAMD8Q96LT4 415 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 ERMAPQ96PL5 475 aaPredicted RBP13.83□□□□□ -0.2
LIME1-209ENST00000494776 IFT27Q9BW83 186 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 RERGLQ9H628 205 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 YY1AP1Q9H869 796 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 CA10Q9NS85 328 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 SPEF1Q9Y4P9 236 aa13.83□□□□□ -0.2
LIME1-209ENST00000494776 IQCMA0A1B0GVH7 501 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 SLC22A23A1A5C7 686 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 PTHP01270 115 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 CD8AP01732 235 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 SERPINA5P05154 406 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 ZNF14P17017 642 aaPredicted RBP13.82□□□□□ -0.2
LIME1-209ENST00000494776 ERFP50548 548 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 FXYD6P3P58550 94 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 GALK2Q01415 458 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 HSF2Q03933 536 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 DAG1Q14118 895 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 MICAQ29983 383 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 KRT80Q6KB66 452 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 YTHDF3Q7Z739 585 aaKnown RBP13.82□□□□□ -0.2
LIME1-209ENST00000494776 ADCK1Q86TW2 530 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 JAZF1Q86VZ6 243 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 AQP11Q8NBQ7 271 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 WFDC11Q8NEX6 87 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 OR52L1Q8NGH7 329 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 FBXO17Q96EF6 278 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 GRIP2Q9C0E4 1043 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 ZNF701Q9NV72 531 aaPredicted RBP13.82□□□□□ -0.2
LIME1-209ENST00000494776 SLC7A8Q9UHI5 535 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 UGT2A1Q9Y4X1 527 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 ROS1P08922 2347 aa13.82□□□□□ -0.2
LIME1-209ENST00000494776 CADP27708 2225 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 OVOL3O00110 214 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 GASTP01350 101 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 APEHP13798 732 aaKnown RBP13.81□□□□□ -0.2
LIME1-209ENST00000494776 PAX1P15863 534 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 LAP3P28838 519 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 SERPINF1P36955 418 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 RIPPLY3P57055 190 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 RPL13AP3Q6NVV1 102 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 ZNF620Q6ZNG0 422 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 SLC30A7Q8NEW0 376 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 NUP37Q8NFH4 326 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 ZNF75AQ96N20 296 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 CACNG6Q9BXT2 260 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 SYT4Q9H2B2 425 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 MMADHCQ9H3L0 296 aaPredicted RBP13.81□□□□□ -0.2
LIME1-209ENST00000494776 VNN3Q9NY84 501 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 PMF1-BGLAPU3KQ54 211 aa13.81□□□□□ -0.2
LIME1-209ENST00000494776 HEATR1Q9H583 2144 aaKnown RBP13.81□□□□□ -0.2
LIME1-209ENST00000494776 PRRC2AP48634 2157 aaKnown RBP13.81□□□□□ -0.2
LIME1-209ENST00000494776 TCRBV3S1A0A5B6 114 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 IMPA2O14732 288 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 SLC16A7O60669 478 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 E2F6O75461 281 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 KHDRBS3O75525 346 aaKnown RBP13.8□□□□□ -0.2
LIME1-209ENST00000494776 TXNDC12O95881 172 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 RENP00797 406 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 OR4A8P0C604 315 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 CD99P14209 185 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 MSR1P21757 451 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 APLNRP35414 380 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 CENPAP49450 140 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 PCBD1P61457 104 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 HGFACQ04756 655 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 SNTB2Q13425 540 aaKnown RBP13.8□□□□□ -0.2
LIME1-209ENST00000494776 GK3PQ14409 553 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 ETFDHQ16134 617 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 TBC1D28Q2M2D7 210 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 CLEC12AQ5QGZ9 265 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 FAM27BQ5VT28 67 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 PRSS57Q6UWY2 283 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 CCDC121Q6ZUS5 278 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 OR10G2Q8NGC3 310 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 OR1J2Q8NGS2 313 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 GIPC3Q8TF64 312 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 NABP1Q96AH0 204 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 LRMDAQ9H2I8 198 aa13.8□□□□□ -0.2
LIME1-209ENST00000494776 C1orf198Q9H425 327 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms