RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 ZNF519Q8TB69 540 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 FAM46AQ96IP4 442 aaKnown RBP28.61■■■□□ 2.17
CBX4-203ENST00000494546 C7orf34Q96L11 122 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 SYT3Q9BQG1 590 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 PIMREGQ9BSJ6 248 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 MYOZ1Q9NP98 299 aaPredicted RBP28.61■■■□□ 2.17
CBX4-203ENST00000494546 YAE1D1Q9NRH1 226 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 MAGEL2Q9UJ55 1249 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 FZR1Q9UM11 496 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 NAV3Q8IVL0 2385 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 IQCMA0A1B0GVH7 501 aa28.6■■■□□ 2.17
CBX4-203ENST00000494546 A0A1W2PRQ8 180 aa28.6■■■□□ 2.17
CBX4-203ENST00000494546 MGRN1O60291 552 aa28.6■■■□□ 2.17
CBX4-203ENST00000494546 ERVK-25P63136 954 aa28.6■■■□□ 2.17
CBX4-203ENST00000494546 MXRA7P84157 204 aa28.6■■■□□ 2.17
CBX4-203ENST00000494546 VLDLRP98155 873 aa28.6■■■□□ 2.17
CBX4-203ENST00000494546 DGCR6Q14129 220 aa28.6■■■□□ 2.17
CBX4-203ENST00000494546 ZBED5Q49AG3 693 aa28.6■■■□□ 2.17
CBX4-203ENST00000494546 SAMD4BQ5PRF9 694 aaKnown RBP28.6■■■□□ 2.17
CBX4-203ENST00000494546 PAQR4Q8N4S7 273 aaPredicted RBP28.6■■■□□ 2.17
CBX4-203ENST00000494546 NABP1Q96AH0 204 aa28.6■■■□□ 2.17
CBX4-203ENST00000494546 C1orf198Q9H425 327 aa28.6■■■□□ 2.17
CBX4-203ENST00000494546 CCNB1IP1Q9NPC3 277 aa28.6■■■□□ 2.17
CBX4-203ENST00000494546 PTHP01270 115 aa28.59■■■□□ 2.17
CBX4-203ENST00000494546 MMP7P09237 267 aaPredicted RBP28.59■■■□□ 2.17
CBX4-203ENST00000494546 FAM157BP0CG42 384 aa28.59■■■□□ 2.17
CBX4-203ENST00000494546 HSF2Q03933 536 aa28.59■■■□□ 2.17
CBX4-203ENST00000494546 KRT72Q14CN4 511 aa28.59■■■□□ 2.17
CBX4-203ENST00000494546 TBC1D28Q2M2D7 210 aa28.59■■■□□ 2.17
CBX4-203ENST00000494546 TMEM249Q2WGJ8 235 aa28.59■■■□□ 2.17
CBX4-203ENST00000494546 FNDC8Q8TC99 324 aa28.59■■■□□ 2.17
CBX4-203ENST00000494546 FOXN4Q96NZ1 517 aa28.59■■■□□ 2.17
CBX4-203ENST00000494546 OR51B6Q9H340 312 aa28.59■■■□□ 2.17
CBX4-203ENST00000494546 LOC390937A0A1W2PQ73 354 aa28.58■■■□□ 2.17
CBX4-203ENST00000494546 NDUFS8O00217 210 aa28.58■■■□□ 2.17
CBX4-203ENST00000494546 TLX2O43763 284 aaPredicted RBP28.58■■■□□ 2.17
CBX4-203ENST00000494546 USF1P22415 310 aaPredicted RBP28.58■■■□□ 2.17
CBX4-203ENST00000494546 C16orf89Q6UX73 402 aa28.58■■■□□ 2.17
CBX4-203ENST00000494546 LRP11Q86VZ4 500 aa28.58■■■□□ 2.17
CBX4-203ENST00000494546 ARIH2OSQ8N7S6 290 aa28.58■■■□□ 2.17
CBX4-203ENST00000494546 OR1J2Q8NGS2 313 aa28.58■■■□□ 2.17
CBX4-203ENST00000494546 OR52J3Q8NH60 311 aa28.58■■■□□ 2.17
CBX4-203ENST00000494546 NEU4Q8WWR8 484 aaPredicted RBP28.58■■■□□ 2.17
CBX4-203ENST00000494546 PYURFQ96I23 114 aa28.58■■■□□ 2.17
CBX4-203ENST00000494546 NDEL1Q9GZM8 345 aa28.58■■■□□ 2.17
CBX4-203ENST00000494546 TPK1Q9H3S4 243 aa28.58■■■□□ 2.17
CBX4-203ENST00000494546 GRHPRQ9UBQ7 328 aa28.58■■■□□ 2.17
CBX4-203ENST00000494546 CD300AQ9UGN4 299 aa28.58■■■□□ 2.17
CBX4-203ENST00000494546 ADAM18Q9Y3Q7 739 aa28.58■■■□□ 2.17
CBX4-203ENST00000494546 TRBV4-1A0A0J9YWV2 114 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 H7C1C5 153 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 M0R233 179 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 SYNGR3O43761 229 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 CD14P08571 375 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 IGFBP1P08833 259 aaPredicted RBP28.57■■■□□ 2.16
CBX4-203ENST00000494546 ZNF26P17031 533 aaPredicted RBP28.57■■■□□ 2.16
CBX4-203ENST00000494546 EVX1P49640 407 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 LCN6P62502 163 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 GGTLC2Q14390 218 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 PABPC1L2AQ5JQF8 200 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 DEFB107AQ8IZN7 70 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 NSMCE2Q96MF7 247 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 LRMDAQ9H2I8 198 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 NDE1Q9NXR1 346 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 REV1Q9UBZ9 1251 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 DUSP13Q9UII6 198 aa28.57■■■□□ 2.16
CBX4-203ENST00000494546 A0A1W2PPL8 197 aa28.56■■■□□ 2.16
CBX4-203ENST00000494546 SLC22A23A1A5C7 686 aa28.56■■■□□ 2.16
CBX4-203ENST00000494546 VWC2LB2RUY7 222 aa28.56■■■□□ 2.16
CBX4-203ENST00000494546 ABCA1O95477 2261 aa28.56■■■□□ 2.16
CBX4-203ENST00000494546 DAOP14920 347 aa28.56■■■□□ 2.16
CBX4-203ENST00000494546 ZNF32P17041 273 aa28.56■■■□□ 2.16
CBX4-203ENST00000494546 ITGA2P17301 1181 aa28.56■■■□□ 2.16
CBX4-203ENST00000494546 APEX1P27695 318 aaKnown RBP28.56■■■□□ 2.16
CBX4-203ENST00000494546 APLNRP35414 380 aa28.56■■■□□ 2.16
CBX4-203ENST00000494546 GUCA1AP43080 201 aaPredicted RBP28.56■■■□□ 2.16
CBX4-203ENST00000494546 NR4A2P43354 598 aa28.56■■■□□ 2.16
CBX4-203ENST00000494546 SEC23BQ15437 767 aa28.56■■■□□ 2.16
CBX4-203ENST00000494546 Q96M85 177 aa28.56■■■□□ 2.16
CBX4-203ENST00000494546 ARPC2O15144 300 aa28.55■■■□□ 2.16
CBX4-203ENST00000494546 ALDH3B1P43353 468 aa28.55■■■□□ 2.16
CBX4-203ENST00000494546 RGS7BPQ6MZT1 257 aaPredicted RBP28.55■■■□□ 2.16
CBX4-203ENST00000494546 CPEB3Q8NE35 698 aaKnown RBP28.55■■■□□ 2.16
CBX4-203ENST00000494546 CCT8L2Q96SF2 557 aa28.55■■■□□ 2.16
CBX4-203ENST00000494546 MYEF2Q9P2K5 600 aaKnown RBP28.55■■■□□ 2.16
CBX4-203ENST00000494546 ADAM21Q9UKJ8 722 aa28.55■■■□□ 2.16
CBX4-203ENST00000494546 AURKCQ9UQB9 309 aa28.55■■■□□ 2.16
CBX4-203ENST00000494546 XKRYO14609 159 aa28.54■■■□□ 2.16
CBX4-203ENST00000494546 CRLF1O75462 422 aa28.54■■■□□ 2.16
CBX4-203ENST00000494546 SNAP29O95721 258 aa28.54■■■□□ 2.16
CBX4-203ENST00000494546 CCNOP22674 350 aa28.54■■■□□ 2.16
CBX4-203ENST00000494546 LAP3P28838 519 aa28.54■■■□□ 2.16
CBX4-203ENST00000494546 OMPP47874 163 aa28.54■■■□□ 2.16
CBX4-203ENST00000494546 LIMS1P48059 325 aa28.54■■■□□ 2.16
CBX4-203ENST00000494546 MAD2L1BPQ15013 274 aaPredicted RBP28.54■■■□□ 2.16
CBX4-203ENST00000494546 FAM27BQ5VT28 67 aa28.54■■■□□ 2.16
CBX4-203ENST00000494546 AKR7LQ8NHP1 331 aa28.54■■■□□ 2.16
CBX4-203ENST00000494546 MCUR1Q96AQ8 359 aa28.54■■■□□ 2.16
CBX4-203ENST00000494546 ZNF570Q96NI8 536 aa28.54■■■□□ 2.16
CBX4-203ENST00000494546 KRCC1Q9NPI7 259 aaPredicted RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms