RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 OPN3Q9H1Y3 402 aaPredicted RBP2.36□□□□□ -2.03
CLHC1-213ENST00000494539 C1orf198Q9H425 327 aa2.36□□□□□ -2.03
CLHC1-213ENST00000494539 UCK1Q9HA47 277 aa2.36□□□□□ -2.03
CLHC1-213ENST00000494539 PATZ1Q9HBE1 687 aaKnown RBP2.36□□□□□ -2.03
CLHC1-213ENST00000494539 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.36□□□□□ -2.03
CLHC1-213ENST00000494539 HRASLS2Q9NWW9 162 aa2.36□□□□□ -2.03
CLHC1-213ENST00000494539 SLC17A7Q9P2U7 560 aa2.36□□□□□ -2.03
CLHC1-213ENST00000494539 SLC2A6Q9UGQ3 507 aa2.36□□□□□ -2.03
CLHC1-213ENST00000494539 MRM2Q9UI43 246 aaKnown RBP2.36□□□□□ -2.03
CLHC1-213ENST00000494539 UBQLN1Q9UMX0 589 aaKnown RBP2.36□□□□□ -2.03
CLHC1-213ENST00000494539 L3MBTL1Q9Y468 752 aa2.36□□□□□ -2.03
CLHC1-213ENST00000494539 PUS1Q9Y606 427 aaKnown RBP eCLIP2.36□□□□□ -2.03
CLHC1-213ENST00000494539 UBN2Q6ZU65 1347 aa2.36□□□□□ -2.03
CLHC1-213ENST00000494539 ADCY9O60503 1353 aa2.36□□□□□ -2.03
CLHC1-213ENST00000494539 PLEKHH1Q9ULM0 1364 aa2.36□□□□□ -2.03
CLHC1-213ENST00000494539 ZNF646O15015 1829 aaPredicted RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 C1orf232A0A0U1RR37 186 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 A0A1B0GW15 77 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 A0A1B0GWB2 263 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 FAM168BA1KXE4 195 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 MGAT4DA6NG13 374 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 ZNF705EA8MWA4 302 aaPredicted RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 LOC110117498-PIK3R3F6TDL0 507 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 CDC7O00311 574 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 DCTN6O00399 190 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 DYNC1I1O14576 645 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 PRMT5O14744 637 aaPredicted RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 XRCC2O43543 280 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 UGT1A9O60656 530 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 MYO1DO94832 1006 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 PLEKHA8P1O95397 391 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 BRI3O95415 125 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 IGHV2-5P01817 119 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 FGGP02679 453 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 TACSTD2P09758 323 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 CD40LGP29965 261 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 HMGCLP35914 325 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 ALDH3B2P48448 385 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 CSNK1A1P48729 337 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 EMP2P54851 167 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 OR2B6P58173 313 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 UBE2G2P60604 165 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 MRPS15P82914 257 aaKnown RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 TLE4Q04727 773 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 ORC2Q13416 577 aaPredicted RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 TRAM2Q15035 370 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 TRMT5Q32P41 509 aaKnown RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 PAN3Q58A45 887 aaKnown RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 VAX1Q5SQQ9 334 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 TPRG1LQ5T0D9 272 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 MARC1Q5VT66 337 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 TIGD3Q6B0B8 471 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 TRIM40Q6P9F5 258 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 PAMR1Q6UXH9 720 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 OR2W3Q7Z3T1 314 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 CMC1Q7Z7K0 106 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 PLCZ1Q86YW0 608 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 NAXDQ8IW45 347 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 PDIK1LQ8N165 341 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 EID2Q8N6I1 236 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 ACOT4Q8N9L9 421 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 OR5B3Q8NH48 314 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 LGALS14Q8TCE9 139 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 SLC7A13Q8TCU3 470 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 ACER1Q8TDN7 264 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 TMEM239Q8WW34 195 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 BAALCQ8WXS3 180 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 TFGQ92734 400 aaPredicted RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 GTF2H4Q92759 462 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 RPEQ96AT9 228 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 DUS3LQ96G46 650 aaKnown RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 ZNF514Q96K75 400 aaPredicted RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 SORT1Q99523 831 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 HCAR1Q9BXC0 346 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 UPF3BQ9BZI7 483 aaKnown RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 CWH43Q9H720 699 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 CAB39LQ9H9S4 337 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 BEX1Q9HBH7 125 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 ANKHQ9HCJ1 492 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 NECAP2Q9NVZ3 263 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 RBAKQ9NYW8 714 aaPredicted RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 CCDC59Q9P031 241 aaKnown RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 SCML1Q9UN30 329 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 ZNF256Q9Y2P7 627 aaPredicted RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 RCL1Q9Y2P8 373 aaKnown RBP2.35□□□□□ -2.03
CLHC1-213ENST00000494539 SBNO1A3KN83 1393 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 CNTNAP1P78357 1384 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 JCADQ9P266 1359 aa2.35□□□□□ -2.03
CLHC1-213ENST00000494539 AQRO60306 1485 aaKnown RBP eCLIP2.34□□□□□ -2.03
CLHC1-213ENST00000494539 RALGAPA1Q6GYQ0 2036 aa2.34□□□□□ -2.03
CLHC1-213ENST00000494539 TRABD2BA6NFA1 517 aa2.34□□□□□ -2.03
CLHC1-213ENST00000494539 E7ENQ6 273 aa2.34□□□□□ -2.03
CLHC1-213ENST00000494539 MKRN2OSH3BPM6 223 aa2.34□□□□□ -2.03
CLHC1-213ENST00000494539 TOR1AO14656 332 aa2.34□□□□□ -2.03
CLHC1-213ENST00000494539 HAT1O14929 419 aa2.34□□□□□ -2.03
CLHC1-213ENST00000494539 MRPS12O15235 138 aaKnown RBP2.34□□□□□ -2.03
CLHC1-213ENST00000494539 EMC8O43402 210 aa2.34□□□□□ -2.03
CLHC1-213ENST00000494539 SNAI2O43623 268 aa2.34□□□□□ -2.03
CLHC1-213ENST00000494539 CLDN11O75508 207 aa2.34□□□□□ -2.03
CLHC1-213ENST00000494539 SCRG1O75711 98 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms