RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 TRAPPC13A5PLN9 417 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 M0QX08 132 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 ANGPT2O15123 496 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 KCNAB3O43448 404 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 TIMM8AO60220 97 aaPredicted RBP8.19□□□□□ -1.1
UBR4-216ENST00000494503 SLC2A10O95528 541 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 SNAP29O95721 258 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 IGHV1-46P01743 117 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 HOXB9P17482 250 aaPredicted RBP8.19□□□□□ -1.1
UBR4-216ENST00000494503 GUCA1AP43080 201 aaPredicted RBP8.19□□□□□ -1.1
UBR4-216ENST00000494503 COMPP49747 757 aaPredicted RBP8.19□□□□□ -1.1
UBR4-216ENST00000494503 IDH3AP50213 366 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 GDI2P50395 445 aaKnown RBP8.19□□□□□ -1.1
UBR4-216ENST00000494503 DAP3P51398 398 aaKnown RBP8.19□□□□□ -1.1
UBR4-216ENST00000494503 TAS2R41P59536 307 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 ERVK-25P63136 954 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 RPL18Q07020 188 aaKnown RBP8.19□□□□□ -1.1
UBR4-216ENST00000494503 SLC3A1Q07837 685 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 TAF11Q15544 211 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 HDDC2Q7Z4H3 204 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 DHDDSQ86SQ9 333 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 FUNDC1Q8IVP5 155 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 AKR7LQ8NHP1 331 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 GEMIN6Q8WXD5 167 aaKnown RBP8.19□□□□□ -1.1
UBR4-216ENST00000494503 THOC1Q96FV9 657 aaKnown RBP8.19□□□□□ -1.1
UBR4-216ENST00000494503 ARHGDIGQ99819 225 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 CPPED1Q9BRF8 314 aaPredicted RBP8.19□□□□□ -1.1
UBR4-216ENST00000494503 EVA1AQ9H8M9 152 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 SLCO1B3Q9NPD5 702 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 ESM1Q9NQ30 184 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 TRIM33Q9UPN9 1127 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 TANC2Q9HCD6 1990 aa8.19□□□□□ -1.1
UBR4-216ENST00000494503 A0A1W2PPL8 197 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 SHOX2O60902 331 aaPredicted RBP8.18□□□□□ -1.1
UBR4-216ENST00000494503 DEAF1O75398 565 aaPredicted RBP8.18□□□□□ -1.1
UBR4-216ENST00000494503 TRMUO75648 421 aaKnown RBP8.18□□□□□ -1.1
UBR4-216ENST00000494503 SBK2P0C263 348 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 ACADSP16219 412 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 ZNF32P17041 273 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 GPX2P18283 190 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 GATA3P23771 443 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 MPV17P39210 176 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 AQP2P41181 271 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 UBA52P62987 128 aaKnown RBP8.18□□□□□ -1.1
UBR4-216ENST00000494503 FMODQ06828 376 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 HNRNPA0Q13151 305 aaKnown RBP8.18□□□□□ -1.1
UBR4-216ENST00000494503 NFYCQ13952 458 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 NPTX1Q15818 432 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 FAM209AQ5JX71 171 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 ZNF101Q8IZC7 436 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 SIGLECL1Q8N7X8 197 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 GPR32P1Q8NGA4 272 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 PFN4Q8NHR9 129 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 SLC25A40Q8TBP6 338 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 MPP4Q96JB8 637 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 C1QTNF5Q9BXJ0 243 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 OR2J1Q9GZK6 312 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 NTN4Q9HB63 628 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 MSL2Q9HCI7 577 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 INIPQ9NRY2 104 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 NKIRAS2Q9NYR9 191 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 LEF1Q9UJU2 399 aaPredicted RBP8.18□□□□□ -1.1
UBR4-216ENST00000494503 SH3GLB1Q9Y371 365 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 NDUFAF1Q9Y375 327 aa8.18□□□□□ -1.1
UBR4-216ENST00000494503 ZSCAN5BA6NJL1 495 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 FOXH1O75593 365 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 TGDSO95455 350 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 IGHV3-13P01766 116 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 THY1P04216 161 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 ASAH2BP0C7U1 165 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 FUT1P19526 365 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 TNFRSF1BP20333 461 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 TNFSF4P23510 183 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 ATP4BP51164 291 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 ARHGDIAP52565 204 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 ARFIP2P53365 341 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 PPP1CBP62140 327 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 TNFAIP6P98066 277 aaPredicted RBP8.17□□□□□ -1.1
UBR4-216ENST00000494503 FOXL1Q12952 345 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 BAMBIQ13145 260 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 SELPLGQ14242 412 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 ZMAT1Q5H9K5 638 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 INTS11Q5TA45 600 aaKnown RBP8.17□□□□□ -1.1
UBR4-216ENST00000494503 NHLRC1Q6VVB1 395 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 RFPL4BQ6ZWI9 263 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 PATL1Q86TB9 770 aaKnown RBP8.17□□□□□ -1.1
UBR4-216ENST00000494503 PTOV1Q86YD1 416 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 ALDH16A1Q8IZ83 802 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 KLHL36Q8N4N3 616 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 ZDHHC22Q8N966 263 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 OR4D11Q8NGI4 311 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 OR10A6Q8NH74 314 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 KLF14Q8TD94 323 aaPredicted RBP8.17□□□□□ -1.1
UBR4-216ENST00000494503 TMEM255BQ8WV15 326 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 ASB10Q8WXI3 467 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 SGTBQ96EQ0 304 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 C7orf26Q96N11 449 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 CCDC28BQ9BUN5 200 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 MRI1Q9BV20 369 aa8.17□□□□□ -1.1
UBR4-216ENST00000494503 SLC19A3Q9BZV2 496 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms