RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 FLRT3Q9NZU0 649 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 FBXL2Q9UKC9 423 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 MGAT4BQ9UQ53 548 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 CAMK2AQ9UQM7 478 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 DLGAP4Q9Y2H0 992 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 CBY1Q9Y3M2 126 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 PTGDR2Q9Y5Y4 395 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 ZANQ9Y493 2812 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 ARID1AO14497 2285 aa7.34□□□□□ -1.24
HDAC6-234ENST00000493923 A0A1W2PPR1 153 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 C1orf226A1L170 272 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 TRAPPC13A5PLN9 417 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 MYO1GB0I1T2 1018 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 TP53I11O14683 189 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 PCDH7O60245 1069 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 STX11O75558 287 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 CTAG2O75638 210 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 RP2O75695 350 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 AQP8O94778 261 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 CT45A8P0DMV1 189 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 CT45A9P0DMV2 189 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 SAGP10523 405 aaPredicted RBP7.33□□□□□ -1.24
HDAC6-234ENST00000493923 CSNK2A2P19784 350 aaPredicted RBP7.33□□□□□ -1.24
HDAC6-234ENST00000493923 BMP5P22003 454 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 PRKACGP22612 351 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 GAS1P54826 345 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 MTPNP58546 118 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 RAB5BP61020 215 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 HOXC5Q00444 222 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 PLCXD2Q0VAA5 305 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 MYBPHQ13203 477 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 GPR68Q15743 365 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 SMN1Q16637 294 aaKnown RBP7.33□□□□□ -1.24
HDAC6-234ENST00000493923 SLC25A35Q3KQZ1 300 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 LBHQ53QV2 105 aaPredicted RBP7.33□□□□□ -1.24
HDAC6-234ENST00000493923 CT45A2Q5DJT8 189 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 ZNF57Q68EA5 555 aaPredicted RBP7.33□□□□□ -1.24
HDAC6-234ENST00000493923 OR5M10Q6IEU7 315 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 C3orf33Q6P1S2 294 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 TMEM200AQ86VY9 491 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 DND1Q8IYX4 353 aaKnown RBP7.33□□□□□ -1.24
HDAC6-234ENST00000493923 OR7G2Q8NG99 324 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 METTL6Q8TCB7 284 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 SFT2D1Q8WV19 159 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 ZBED6CLQ96FA7 236 aaPredicted RBP7.33□□□□□ -1.24
HDAC6-234ENST00000493923 NARS2Q96I59 477 aaKnown RBP7.33□□□□□ -1.24
HDAC6-234ENST00000493923 LCORQ96JN0 433 aaPredicted RBP7.33□□□□□ -1.24
HDAC6-234ENST00000493923 VSTM2LQ96N03 204 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 TRIB1Q96RU8 372 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 BARHL1Q9BZE3 327 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 SLC25A32Q9H2D1 315 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 MIXL1Q9H2W2 232 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 OPA3Q9H6K4 179 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 PPP1R3EQ9H7J1 279 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 BRF2Q9HAW0 419 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 GSN-AS1Q9NRJ2 163 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 ASIC5Q9NY37 505 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 NDUFAF4Q9P032 175 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 VPS29Q9UBQ0 182 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 UTS2RQ9UKP6 389 aa7.33□□□□□ -1.24
HDAC6-234ENST00000493923 GPR55Q9Y2T6 319 aaPredicted RBP7.33□□□□□ -1.24
HDAC6-234ENST00000493923 A0A096LPI6 279 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 LOC390937A0A1W2PQ73 354 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 FAM221AA4D161 298 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 PRAMEF25A6NGN4 478 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 ZNF729A6NN14 1252 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-234ENST00000493923 NUDT19A8MXV4 375 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 SMLR1H3BR10 107 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 LINC01387J3KSC0 135 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 L7N2F9 121 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 SYT5O00445 386 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 TO15178 435 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 TSPAN2O60636 221 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 CDRT1O95170 752 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 MPC2O95563 127 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 PLATP00750 562 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 LINC00032P0C843 101 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 GABRA1P14867 456 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 PPP3CBP16298 524 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 RAB4AP20338 218 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 PVALBP20472 110 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-234ENST00000493923 C21orf33P30042 268 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-234ENST00000493923 PPICP45877 212 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 ART1P52961 327 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 DIO3P55073 304 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 CLDN15P56746 228 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 B3GALT5-AS1P59052 145 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 SRYQ05066 204 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 HNRNPA0Q13151 305 aaKnown RBP7.32□□□□□ -1.24
HDAC6-234ENST00000493923 CAMK2DQ13557 499 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 TOMM20Q15388 145 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 HFEQ30201 348 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 PLA1AQ53H76 456 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 C6orf136Q5SQH8 315 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 AVPI1Q5T686 147 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 NSUN5P2Q63ZY6 315 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 HAGHLQ6PII5 290 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-234ENST00000493923 BAIAP2L2Q6UXY1 529 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 SPNS3Q6ZMD2 512 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 ZNF730Q6ZMV8 503 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms