RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SELENOMQ8WWX9 145 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CDKL2Q92772 493 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 TOMM40LQ969M1 308 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 TMBIM1Q969X1 311 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 TM4SF18Q96CE8 201 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 SPACA9Q96E40 222 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 WDR34Q96EX3 536 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 C16orf58Q96GQ5 468 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 SH3YL1Q96HL8 342 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CYYR1Q96J86 154 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 RILPQ96NA2 401 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 IP6K3Q96PC2 410 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 DGAT2Q96PD7 388 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 TSSK3Q96PN8 268 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 FMO2Q99518 471 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 NKX3-1Q99801 234 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 NAT9Q9BTE0 207 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 OR2B2Q9GZK3 357 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 PCBD2Q9H0N5 130 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 RAB17Q9H0T7 212 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 TUBB1Q9H4B7 451 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 RPF2Q9H7B2 306 aaKnown RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 ANKZF1Q9H8Y5 726 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 GNB4Q9HAV0 340 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 NMRAL1Q9HBL8 299 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 MID1IP1Q9NPA3 183 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 PFDN4Q9NQP4 134 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 HPF1Q9NWY4 346 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 GIN1Q9NXP7 522 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 MRPL15Q9P015 296 aaKnown RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 TXNDC16Q9P2K2 825 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 C19orf25Q9UFG5 118 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 BCAP29Q9UHQ4 241 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 BAIAP2L1Q9UHR4 511 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CES1P1Q9UKY3 287 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF835Q9Y2P0 537 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 ACOT9Q9Y305 439 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 UTP11Q9Y3A2 253 aaKnown RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CHCHD2Q9Y6H1 151 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 KCNE3Q9Y6H6 103 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 CLCA3PQ9Y6N3 262 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.48□□□□□ -2.014e-10■■■■■ 27.4
PTCD3-218ENST00000493430 DSCAML1Q8TD84 2053 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 TACC2O95359 2948 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 SETD2Q9BYW2 2564 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-218ENST00000493430 ADGRG4Q8IZF6 3080 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 AKAP9Q99996 3911 aa2.48□□□□□ -2.01
PTCD3-218ENST00000493430 IGHV3-15A0A0B4J1V0 119 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 EEF1E1-BLOC1S5C9J1V9 151 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 AP3B1O00203 1094 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 EIF3HO15372 352 aaKnown RBP eCLIP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 EEF1E1O43324 174 aaKnown RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 XRCC3O43542 346 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF189O75820 626 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 SCELO95171 688 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 OR2C1O95371 312 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 GPR75O95800 540 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 TGM6O95932 706 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ABCB1P08183 1280 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 LINC00032P0C843 101 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 CT45A8P0DMV1 189 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 CT45A9P0DMV2 189 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 SLC2A2P11168 524 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 COX6B1P14854 86 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 GABRB1P18505 474 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 HMOX2P30519 316 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 TIA1P31483 386 aaKnown RBP eCLIP2.47□□□□□ -2.017e-7■■■□□ 17.1
PTCD3-218ENST00000493430 HSD17B3P37058 310 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 SLC6A8P48029 635 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 EMDP50402 254 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 XKP51811 444 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 SUCLG1P53597 346 aaKnown RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 MAPK12P53778 367 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 RAD23AP54725 363 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 CLDN15P56746 228 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ATP6V0D1P61421 351 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 TRA2BP62995 288 aaKnown RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 CKAP4Q07065 602 aaKnown RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 PLCXD2Q0VAA5 305 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 IRF3Q14653 427 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 CD226Q15762 336 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 NTRK2Q16620 822 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF630Q2M218 657 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 RNF212Q495C1 297 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ACSF3Q4G176 576 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 PHLDA2Q53GA4 152 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 CT45A2Q5DJT8 189 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF678Q5SXM1 525 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 C1orf185Q5T7R7 199 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 LGSNQ5TDP6 509 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 LCN1P1Q5VSP4 162 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 OR52E8Q6IFG1 317 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 C11orf88Q6PI97 169 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ARSKQ6UWY0 536 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 HSDL2Q6YN16 418 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 Q6ZPB1 254 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 RTL4Q6ZR62 310 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 MARCH3Q86UD3 253 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 RTN4RL2Q86UN3 420 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ANKRD46Q86W74 232 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms