RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 DCTN3O75935 186 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 STAMBPO95630 424 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 IGHMP01871 453 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 ACHEP22303 614 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 TUBG1P23258 451 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 IFNGR2P38484 337 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 GDI2P50395 445 aaKnown RBP11.72□□□□□ -0.53
IRF1-210ENST00000493208 ZNF133P52736 654 aaPredicted RBP11.72□□□□□ -0.53
IRF1-210ENST00000493208 CTXN1P60606 82 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 PSME3P61289 254 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 SGCAQ16586 387 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 ARMC4Q5T2S8 1044 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 ZER1Q7Z7L7 766 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 SYT9Q86SS6 491 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 LRRC18Q8N456 261 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 RDH5Q92781 318 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 POP5Q969H6 163 aaKnown RBP11.72□□□□□ -0.53
IRF1-210ENST00000493208 HSH2DQ96JZ2 352 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 COG8Q96MW5 612 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 FOXN4Q96NZ1 517 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 BPESC1Q9GZL8 116 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 FAM107BQ9H098 131 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 CHODLQ9H9P2 273 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 SEC61A2Q9H9S3 476 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 ELOVL3Q9HB03 270 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 TUBG2Q9NRH3 451 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 C20orf141Q9NUB4 165 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 DECR2Q9NUI1 292 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 NDRG4Q9ULP0 352 aaKnown RBP11.72□□□□□ -0.53
IRF1-210ENST00000493208 TIMM10BQ9Y5J6 103 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 ZNF503-AS2A6NEH8 195 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 VWC2LB2RUY7 222 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 H3BSA7 217 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 TPD52L2O43399 206 aaKnown RBP11.71□□□□□ -0.53
IRF1-210ENST00000493208 H1F0P07305 194 aaKnown RBP11.71□□□□□ -0.53
IRF1-210ENST00000493208 TSPAN19P0C672 248 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 RHCEP18577 417 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 CCNOP22674 350 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 STOMP27105 288 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 GSK3BP49841 420 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 UCP2P55851 309 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 TMEM33P57088 247 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 MYBPC1Q00872 1141 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 KRTAP1-1Q07627 177 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 SCRN3Q0VDG4 424 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 FXNQ16595 210 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 ZNF718Q3SXZ3 478 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 SPATS1Q496A3 300 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 FGD3Q5JSP0 725 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 GPR139Q6DWJ6 353 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 DNM1P34Q6PK57 102 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 TMPRSS11FQ6ZWK6 438 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 FAM156AQ8NDB6 213 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 ICA1LQ8NDH6 482 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 OR51A7Q8NH64 312 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 NSMAFQ92636 917 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 SYT3Q9BQG1 590 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 MRPL37Q9BZE1 423 aaKnown RBP11.71□□□□□ -0.53
IRF1-210ENST00000493208 ABCD2Q9UBJ2 740 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 MAGEL2Q9UJ55 1249 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 ENPP4Q9Y6X5 453 aa11.71□□□□□ -0.53
IRF1-210ENST00000493208 CSPG4Q6UVK1 2322 aa11.71□□□□□ -0.54
IRF1-210ENST00000493208 A0A1W2PPL8 197 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 A0A1W2PRQ8 180 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 NME4O00746 187 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 GPRIN2O60269 458 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 LY6HO94772 140 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 CST2P09228 141 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 IGHV4-31P0DP07 118 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 ANPEPP15144 967 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 SRD5A1P18405 259 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 MSR1P21757 451 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 APEX1P27695 318 aaKnown RBP11.7□□□□□ -0.54
IRF1-210ENST00000493208 GPR6P46095 362 aaPredicted RBP11.7□□□□□ -0.54
IRF1-210ENST00000493208 YAP1P46937 504 aaKnown RBP11.7□□□□□ -0.54
IRF1-210ENST00000493208 RPS6KA3P51812 740 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 MXRA7P84157 204 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 SLC3A1Q07837 685 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 DGCR6Q14129 220 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 LAPTM4AQ15012 233 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 ZBED5Q49AG3 693 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 PABPC1L2AQ5JQF8 200 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 SAMD4BQ5PRF9 694 aaKnown RBP11.7□□□□□ -0.54
IRF1-210ENST00000493208 FAM27BQ5VT28 67 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 GLYATQ6IB77 296 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 PGM2L1Q6PCE3 622 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 C16orf89Q6UX73 402 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 VTCN1Q7Z7D3 282 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 ADCK1Q86TW2 530 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 MYPOPQ86VE0 399 aaPredicted RBP11.7□□□□□ -0.54
IRF1-210ENST00000493208 TSPYL5Q86VY4 417 aaPredicted RBP11.7□□□□□ -0.54
IRF1-210ENST00000493208 LINC01356Q8N9X3 169 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 MOSPD2Q8NHP6 518 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 IPCEF1Q8WWN9 437 aaPredicted RBP11.7□□□□□ -0.54
IRF1-210ENST00000493208 TMEM158Q8WZ71 300 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 TIMD4Q96H15 378 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 ZNF570Q96NI8 536 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 LRRC37BQ96QE4 947 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 DIRC2Q96SL1 478 aa11.7□□□□□ -0.54
IRF1-210ENST00000493208 EGLN1Q9GZT9 426 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms