RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 ZNF362Q5T0B9 420 aaPredicted RBP11.82□□□□□ -0.52
MSH6-208ENST00000493177 THEM4Q5T1C6 240 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 BCDIN3DQ7Z5W3 292 aaKnown RBP11.82□□□□□ -0.52
MSH6-208ENST00000493177 BTLAQ7Z6A9 289 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 POMGNT2Q8NAT1 580 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 BBS1Q8NFJ9 593 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 OR2T4Q8NH00 348 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 RHOXF1Q8NHV9 184 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 CNIH3Q8TBE1 160 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 MCHR2Q969V1 340 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 STARD4Q96DR4 205 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 Q96MT0 163 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 TSSK2Q96PF2 358 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 NUAK2Q9H093 628 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 SLC7A10Q9NS82 523 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 A0A1W2PPL8 197 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 SH3D21A4FU49 640 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 ZNF587BE7ETH6 402 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 DENRO43583 198 aaKnown RBP11.81□□□□□ -0.52
MSH6-208ENST00000493177 ENTPD6O75354 484 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 CTAG2O75638 210 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 CLUP10909 449 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 SPI1P17947 270 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 ZNF84P51523 738 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 SLC25A1P53007 311 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 ISL1P61371 349 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 ROR2Q01974 943 aaKnown RBP11.81□□□□□ -0.52
MSH6-208ENST00000493177 DBPQ10586 325 aaPredicted RBP11.81□□□□□ -0.52
MSH6-208ENST00000493177 FAPQ12884 760 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 MED21Q13503 144 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 APOFQ13790 326 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 MEDAGQ5VYS4 303 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 TFAP2EQ6VUC0 442 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 ABHD12BQ7Z5M8 362 aaPredicted RBP11.81□□□□□ -0.52
MSH6-208ENST00000493177 GID4Q8IVV7 300 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 OR51L1Q8NGJ5 315 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 OR6K6Q8NGW6 343 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 PTP4A1Q93096 173 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 ZNF582Q96NG8 517 aaPredicted RBP11.81□□□□□ -0.52
MSH6-208ENST00000493177 FOXN4Q96NZ1 517 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 DDOQ99489 341 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 HCAR1Q9BXC0 346 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 LINC00470Q9BZP3 86 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 CRLF2Q9HC73 371 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 GPR35Q9HC97 309 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 B9D1Q9UPM9 204 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 FKBP7Q9Y680 259 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 MAST4O15021 2626 aa11.81□□□□□ -0.52
MSH6-208ENST00000493177 IGKV1D-43A0A0B4J1Z2 117 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 SNTNA6NMZ2 147 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 DHHO43323 396 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 HLA-DQA2P01906 255 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 CTLA4P16410 223 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 GABRB1P18505 474 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 FMO3P31513 532 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 CD79BP40259 229 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 GUCA1AP43080 201 aaPredicted RBP11.8□□□□□ -0.52
MSH6-208ENST00000493177 CDH11P55287 796 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 EFNB1P98172 346 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 FAM27E3Q08E93 113 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 CDK5R2Q13319 367 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 ETFDHQ16134 617 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 HIST3H3Q16695 136 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 LCN1P1Q5VSP4 162 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 C9orf135Q5VTT2 229 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 AADACL4Q5VUY2 407 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 NXNL2Q5VZ03 156 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 FBXW9Q5XUX1 488 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 LRFN4Q6PJG9 635 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 SLC25A47Q6Q0C1 308 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.8□□□□□ -0.52
MSH6-208ENST00000493177 OR6V1Q8N148 313 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 ZNF610Q8N9Z0 462 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 APH1BQ8WW43 257 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 NRGNQ92686 78 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 RFKQ969G6 155 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 DACH2Q96NX9 599 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 MED18Q9BUE0 208 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 NMNAT2Q9BZQ4 307 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 SEC61A2Q9H9S3 476 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 PLSCR4Q9NRQ2 329 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 ELOVL5Q9NYP7 299 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 COA3Q9Y2R0 106 aaPredicted RBP11.8□□□□□ -0.52
MSH6-208ENST00000493177 LRRC42Q9Y546 428 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 CELSR2Q9HCU4 2923 aa11.8□□□□□ -0.52
MSH6-208ENST00000493177 DCTN6O00399 190 aa11.79□□□□□ -0.52
MSH6-208ENST00000493177 PRODHO43272 600 aa11.79□□□□□ -0.52
MSH6-208ENST00000493177 CD8BP10966 210 aa11.79□□□□□ -0.52
MSH6-208ENST00000493177 DNASE1P24855 282 aa11.79□□□□□ -0.52
MSH6-208ENST00000493177 ART1P52961 327 aa11.79□□□□□ -0.52
MSH6-208ENST00000493177 NUDT6P53370 316 aa11.79□□□□□ -0.52
MSH6-208ENST00000493177 DAZAP2Q15038 168 aaPredicted RBP11.79□□□□□ -0.52
MSH6-208ENST00000493177 OCLNQ16625 522 aa11.79□□□□□ -0.52
MSH6-208ENST00000493177 CEACAM16Q2WEN9 425 aa11.79□□□□□ -0.52
MSH6-208ENST00000493177 SLC35D3Q5M8T2 416 aa11.79□□□□□ -0.52
MSH6-208ENST00000493177 C10orf128Q5T292 105 aa11.79□□□□□ -0.52
MSH6-208ENST00000493177 MEPCEQ7L2J0 689 aaKnown RBP11.79□□□□□ -0.52
MSH6-208ENST00000493177 LINGO2Q7L985 606 aa11.79□□□□□ -0.52
MSH6-208ENST00000493177 CDC20BQ86Y33 519 aa11.79□□□□□ -0.52
MSH6-208ENST00000493177 NMD3Q96D46 503 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms