RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 OR11A1Q9GZK7 315 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 ABCG5Q9H222 651 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 RNF121Q9H920 327 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 PLEKHA1Q9HB21 404 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 NOX4Q9NPH5 578 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 SERINC1Q9NRX5 453 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 MRPL22Q9NWU5 206 aaKnown RBP9.64□□□□□ -0.87
USP4-214ENST00000491791 PPP4R1LQ9P1A2 415 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 GPN3Q9UHW5 284 aaPredicted RBP9.64□□□□□ -0.87
USP4-214ENST00000491791 RPH3AQ9Y2J0 694 aaPredicted RBP9.64□□□□□ -0.87
USP4-214ENST00000491791 ITPR1Q14643 2758 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 A0A0G2JMP0 313 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 A0A0X1KG70 313 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 C9J4A7 227 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 ZNF593O00488 134 aaPredicted RBP9.63□□□□□ -0.87
USP4-214ENST00000491791 EFNA2O43921 213 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 SRSF10O75494 262 aaKnown RBP9.63□□□□□ -0.87
USP4-214ENST00000491791 OR2J2O76002 312 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 ISG15P05161 165 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 RAB40ALP0C0E4 278 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 COX6A1P12074 109 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 IMPDH2P12268 514 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 CTLA4P16410 223 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 ZNF28P17035 718 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 EIF2B2P49770 351 aaKnown RBP9.63□□□□□ -0.87
USP4-214ENST00000491791 P2RY4P51582 365 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 TPTEP56180 551 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 CLDN20P56880 219 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 FOXL2P58012 376 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 MRPS10P82664 201 aaKnown RBP9.63□□□□□ -0.87
USP4-214ENST00000491791 CD300CQ08708 224 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 FAM199XQ6PEV8 388 aaPredicted RBP9.63□□□□□ -0.87
USP4-214ENST00000491791 OPN5Q6U736 354 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 LRRN1Q6UXK5 716 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 STAC2Q6ZMT1 411 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 C16orf47Q6ZP98 133 aaPredicted RBP9.63□□□□□ -0.87
USP4-214ENST00000491791 DNM1P46Q6ZS02 220 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 SPATC1Q76KD6 591 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 HDDC2Q7Z4H3 204 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 LRRTM1Q86UE6 522 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 SLC26A10Q8NG04 563 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 OR4M2Q8NGB6 313 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 OR6N2Q8NGY6 317 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 OR6F1Q8NGZ6 308 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 GPR148Q8TDV2 347 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 RHBDD1Q8TEB9 315 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 DEDD2Q8WXF8 326 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 RAB40AQ8WXH6 277 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 RFT1Q96AA3 541 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 ZBTB8AQ96BR9 441 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 ABHD1Q96SE0 405 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 ZPBPQ9BS86 351 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 THAP7Q9BT49 309 aaPredicted RBP9.63□□□□□ -0.87
USP4-214ENST00000491791 ANGPTL4Q9BY76 406 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 MRPL13Q9BYD1 178 aaKnown RBP9.63□□□□□ -0.87
USP4-214ENST00000491791 COMMD4Q9H0A8 199 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 SLITRK2Q9H156 845 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 MOV10Q9HCE1 1003 aaKnown RBP9.63□□□□□ -0.87
USP4-214ENST00000491791 MED11Q9P086 117 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 TEKT2Q9UIF3 430 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 HDGFL3Q9Y3E1 203 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 CHCHD2Q9Y6H1 151 aaPredicted RBP9.63□□□□□ -0.87
USP4-214ENST00000491791 V9GY05 133 aa9.63□□□□□ -0.87
USP4-214ENST00000491791 PCNX3Q9H6A9 2034 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 TRABD2BA6NFA1 517 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 TVP23AA6NH52 213 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 FAM171A2A8MVW0 826 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 C11orf98E9PRG8 122 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 H7C1C5 153 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 SLC16A7O60669 478 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 KHDRBS3O75525 346 aaKnown RBP9.62□□□□□ -0.87
USP4-214ENST00000491791 LDOC1O95751 146 aaPredicted RBP9.62□□□□□ -0.87
USP4-214ENST00000491791 PSKH1P11801 424 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 SLC6A1P30531 599 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 KIR3DL2P43630 455 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 ZNF41P51814 821 aaPredicted RBP9.62□□□□□ -0.87
USP4-214ENST00000491791 RAG2P55895 527 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 LCN6P62502 163 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 HSF1Q00613 529 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 FOXF1Q12946 379 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 DYRK1AQ13627 763 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 TAB1Q15750 504 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 KCNMB1Q16558 191 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 SLC36A2Q495M3 483 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 PLA1AQ53H76 456 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 ARSKQ6UWY0 536 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 SLC35D2Q76EJ3 337 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 NDUFAF7Q7L592 441 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 GHDCQ8N2G8 530 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 PRSS35Q8N3Z0 413 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 GTPBP8Q8N3Z3 284 aaPredicted RBP9.62□□□□□ -0.87
USP4-214ENST00000491791 WDSUB1Q8N9V3 476 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 OR10G3Q8NGC4 313 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 OR5H6Q8NGV6 325 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 ENKURQ8TC29 256 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 HSD17B8Q92506 261 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 NSMAFQ92636 917 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 YIPF5Q969M3 257 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 CREB3L1Q96BA8 519 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 ARL5BQ96KC2 179 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms