RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TPRP12270 2363 aaKnown RBP20.45■□□□□ 0.86
USF3-203ENST00000491165 G3V3Y1 287 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 HIST1H1CP16403 213 aaKnown RBP20.45■□□□□ 0.86
USF3-203ENST00000491165 GIFP27352 417 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 LCN1P31025 176 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 CYB561P49447 251 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 CD276Q5ZPR3 534 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 LSMEM1Q8N8F7 131 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 ZNF527Q8NB42 609 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 PAQR8Q8TEZ7 354 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 SMAD5Q99717 465 aaKnown RBP20.45■□□□□ 0.86
USF3-203ENST00000491165 OR51J1Q9H342 316 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 MRPS7Q9Y2R9 242 aaKnown RBP20.45■□□□□ 0.86
USF3-203ENST00000491165 ACACBO00763 2458 aa20.45■□□□□ 0.86
USF3-203ENST00000491165 A0A0B4J203 849 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 GMFGO60234 142 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 NDUFB2O95178 105 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 UCHL1P09936 223 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 SIRPAP78324 504 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 OC90Q02509 493 aaPredicted RBP20.44■□□□□ 0.86
USF3-203ENST00000491165 GGTLC2Q14390 218 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 CEP78Q5JTW2 689 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 FAM71CQ8NEG0 241 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 CITED4Q96RK1 184 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 C7orf50Q9BRJ6 194 aaKnown RBP20.44■□□□□ 0.86
USF3-203ENST00000491165 CACNG6Q9BXT2 260 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 MFRPQ9BY79 579 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 HES7Q9BYE0 225 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 TBL1XR1Q9BZK7 514 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 LRFN1Q9P244 771 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 SLC23A1Q9UHI7 598 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 CAMK2AQ9UQM7 478 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 A0A0G2JMM0 328 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 A0A1W2PPB8 328 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 A0A1W2PRS3 328 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 KIR3DP1A8MWS1 328 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 MAGEB4O15481 346 aaPredicted RBP20.44■□□□□ 0.86
USF3-203ENST00000491165 GATBO75879 557 aaKnown RBP20.44■□□□□ 0.86
USF3-203ENST00000491165 CSTAP01040 98 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 ANXA3P12429 323 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 CDONQ4KMG0 1287 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 HSD17B12Q53GQ0 312 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 RPL22L1Q6P5R6 122 aaKnown RBP20.44■□□□□ 0.86
USF3-203ENST00000491165 SYT9Q86SS6 491 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 SLC35F2Q8IXU6 374 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 ZNF431Q8TF32 576 aaPredicted RBP20.44■□□□□ 0.86
USF3-203ENST00000491165 SNX33Q8WV41 574 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 KLRF1Q9NZS2 232 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 ICAM5Q9UMF0 924 aa20.44■□□□□ 0.86
USF3-203ENST00000491165 A0A1W2PQD3 144 aa20.43■□□□□ 0.86
USF3-203ENST00000491165 NDUFB5O43674 189 aa20.43■□□□□ 0.86
USF3-203ENST00000491165 ADH7P40394 386 aa20.43■□□□□ 0.86
USF3-203ENST00000491165 NAA10P41227 235 aaPredicted RBP20.43■□□□□ 0.86
USF3-203ENST00000491165 TMPRSS3P57727 454 aa20.43■□□□□ 0.86
USF3-203ENST00000491165 ZNF117Q03924 483 aa20.43■□□□□ 0.86
USF3-203ENST00000491165 ULK3Q6PHR2 472 aa20.43■□□□□ 0.86
USF3-203ENST00000491165 LINC00114Q6XXX2 140 aa20.43■□□□□ 0.86
USF3-203ENST00000491165 OR51L1Q8NGJ5 315 aa20.43■□□□□ 0.86
USF3-203ENST00000491165 DUSP19Q8WTR2 217 aa20.43■□□□□ 0.86
USF3-203ENST00000491165 DIABLOQ9NR28 239 aa20.43■□□□□ 0.86
USF3-203ENST00000491165 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.43■□□□□ 0.86
USF3-203ENST00000491165 SLCO1C1Q9NYB5 712 aa20.43■□□□□ 0.86
USF3-203ENST00000491165 SPATA2Q9UM82 520 aa20.43■□□□□ 0.86
USF3-203ENST00000491165 IER3IP1Q9Y5U9 82 aa20.43■□□□□ 0.86
USF3-203ENST00000491165 NCKAP5O14513 1909 aa20.43■□□□□ 0.86
USF3-203ENST00000491165 TRBV2A0A0J9YWF9 115 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 CD1AP06126 327 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 LGALS3BPQ08380 585 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 SKP2Q13309 424 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 MFAP5Q13361 173 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 ZNF550Q7Z398 422 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 SLC39A7Q92504 469 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 GPR137Q96N19 417 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 OR14A2Q96R54 314 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 METTL7AQ9H8H3 244 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 ZFP64Q9NPA5 681 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 NRIP3Q9NQ35 241 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 DEPPQ9NTK1 212 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 PTTG3PQ9NZH4 202 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 RPS6KB2Q9UBS0 482 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 GNG8Q9UK08 70 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 MGAT4AQ9UM21 535 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 GSTZ1O43708 216 aaPredicted RBP20.42■□□□□ 0.86
USF3-203ENST00000491165 TSC22D2O75157 780 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 RPS11P62280 158 aaKnown RBP eCLIP20.42■□□□□ 0.86
USF3-203ENST00000491165 CXADRP78310 365 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 LUZP2Q86TE4 346 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 ZNF671Q8TAW3 534 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 NTNG2Q96CW9 530 aa20.42■□□□□ 0.86
USF3-203ENST00000491165 AK6Q9Y3D8 172 aaKnown RBP20.42■□□□□ 0.86
USF3-203ENST00000491165 MAP1BP46821 2468 aaKnown RBP20.41■□□□□ 0.86
USF3-203ENST00000491165 K7EM74 188 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 TP53I11O14683 189 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 GNB5O14775 395 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 PDGFAP04085 211 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 UBL4AP11441 157 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 EDNRAP25101 427 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 OR3A3P47888 321 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 RAG2P55895 527 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 GPR85P60893 370 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms