RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ATP5LO75964 103 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 SCELO95171 688 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 KLF8O95600 359 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 TMEM50AO95807 157 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 ANXA5P08758 320 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 IL32P24001 234 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 GCAP28676 217 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 PRDX3P30048 256 aaKnown RBP3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 IFNA8P32881 189 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 MRPL19P49406 292 aaKnown RBP3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 APOC4P55056 127 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 LCN2P80188 198 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 KLRB1Q12918 225 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 PMS2P3Q13401 168 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 ART3Q13508 389 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 GPR107Q5VW38 600 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 C1orf94Q6P1W5 598 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 SASS6Q6UVJ0 657 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 UNQ9370/PRO34162Q6UXP9 181 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 LRRC31Q6UY01 552 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 LRRC74BQ6ZQY2 392 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 PID1Q7Z2X4 250 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 C8orf31Q8N9H6 132 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 CCDC71LQ8N9Z2 235 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 GPR151Q8TDV0 419 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 C7orf33Q8WU49 177 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 NAT6Q93015 286 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 CXorf40BQ96DE9 158 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 CHMP6Q96FZ7 201 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 PLEKHA8Q96JA3 519 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 CSPG4P5Q96PW8 444 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 ARHGDIGQ99819 225 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 MED10Q9BTT4 135 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 RNF126Q9BV68 326 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 DRC3Q9H069 523 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 PPA2Q9H2U2 334 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 PLGRKTQ9HBL7 147 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 MS4A12Q9NXJ0 267 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 TREM2Q9NZC2 230 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 PSMD13Q9UNM6 376 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 USP47Q96K76 1375 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 IGHV2-70DA0A0C4DH43 119 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 A0A1W2PRD5 423 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 USP27XA6NNY8 438 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 RGS16O15492 202 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 PRKYO43930 277 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 SCN2BO60939 215 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 HSBP1O75506 76 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 ETHE1O95571 254 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 AP2A1O95782 977 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 MMP1P03956 469 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 TCN1P20061 433 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 PMCHP20382 165 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 BCKDHBP21953 392 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 DCKP27707 260 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 HTR1EP28566 365 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 SLC26A3P40879 764 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 PRKXP51817 358 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 UCNP55089 124 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 ATP5J2P56134 94 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 ERVK-25P63136 954 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 SIGLEC14Q08ET2 396 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 PIGHQ14442 188 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 GRB7Q14451 532 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 DMC1Q14565 340 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 ARL6IP1Q15041 203 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 NSDHLQ15738 373 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 SLC15A2Q16348 729 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 PSG3Q16557 428 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 SLC25A52Q3SY17 297 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 STUMQ69YW2 141 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 NIPA1Q7RTP0 329 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 JAGN1Q8N5M9 183 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 LRRC75AQ8NAA5 344 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 OR4F6Q8NGB9 312 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 OR5L2Q8NGL0 311 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 CDC26Q8NHZ8 85 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 FAM110BQ8TC76 370 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 UBE2E3Q969T4 207 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZNF514Q96K75 400 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZNF641Q96N77 438 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 OPALINQ96PE5 141 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 XPO6Q96QU8 1125 aaKnown RBP3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 CNN2Q99439 309 aaKnown RBP3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 SHCBP1LQ9BZQ2 653 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 SAV1Q9H4B6 383 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 TMEM165Q9HC07 324 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 B3GNT2Q9NY97 397 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 DDX19BQ9UMR2 479 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 POFUT2Q9Y2G5 429 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 PPIL1Q9Y3C6 166 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 AK6Q9Y3D8 172 aaKnown RBP3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 ATP10AO60312 1499 aa3.26□□□□□ -1.89
HMGB1P38-201ENST00000490557 A0A1W2PPV9 198 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 CENPXA8MT69 81 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZNF99A8MXY4 864 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 E7EWF7 191 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 SIRPB1O00241 398 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 RFXANKO14593 260 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 TOR1AO14656 332 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms