RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 LCE3CQ5T5A8 94 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 FAM72AQ5TYM5 149 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 FAM72DQ6L9T8 149 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CD300LGQ6UXG3 332 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 NFE4Q86UQ8 179 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 FAM72BQ86X60 149 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 LACC1Q8IV20 430 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 KIR2DL5AQ8N109 375 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 SYS1Q8N2H4 156 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ZSCAN4Q8NAM6 433 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 INO80EQ8NBZ0 244 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ICA1LQ8NDH6 482 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 OR9Q2Q8NGE9 314 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 OR9A4Q8NGU2 314 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 KIR2DL5BQ8NHK3 375 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 LYPD6BQ8NI32 183 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 RPEQ96AT9 228 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 LRRC45Q96CN5 670 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CXorf40BQ96DE9 158 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ZBED6CLQ96FA7 236 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 COL21A1Q96P44 957 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 OPALINQ96PE5 141 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 XPO6Q96QU8 1125 aaKnown RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 NAPGQ99747 312 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ATF6BQ99941 703 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 C7orf50Q9BRJ6 194 aaKnown RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 UTP23Q9BRU9 249 aaKnown RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 TUBGCP2Q9BSJ2 902 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 FAIM2Q9BWQ8 316 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 COA1Q9GZY4 146 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 HDHD2Q9H0R4 259 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 NT5DC2Q9H857 520 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 POLD4Q9HCU8 107 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 SIRT7Q9NRC8 400 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 TEX10Q9NXF1 929 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 RBAKQ9NYW8 714 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 BFARQ9NZS9 450 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 IFNKQ9P0W0 207 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 NUP50Q9UKX7 468 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 FAF1Q9UNN5 650 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 RCL1Q9Y2P8 373 aaKnown RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 YARS2Q9Y2Z4 477 aaKnown RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 DHRS7Q9Y394 339 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 PSME4Q14997 1843 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF609O15014 1411 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 A8MUA0 341 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 SIRPB1O00241 398 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF749O43361 778 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 EDIL3O43854 480 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 OR10H3O60404 316 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 CRTAPO75718 401 aaPredicted RBP2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 VAMP5O95183 116 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 FGGP02679 453 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 IGHV4-38-2P0DP08 117 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 PSMB5P28074 263 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 HTR2CP28335 458 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 ACVR1BP36896 505 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 LEPP41159 167 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 GPR1P46091 355 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 RFX3P48380 749 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 HCAR3P49019 387 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 KPNA2P52292 529 aaKnown RBP2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 ADARB1P78563 741 aaKnown RBP2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 CDR2Q01850 454 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 RIPPLY1Q0D2K3 151 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF154Q13106 437 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 ZBTB6Q15916 424 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 CCDC6Q16204 474 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 SLC22A6Q4U2R8 563 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 SMUG1Q53HV7 270 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 CYBRD1Q53TN4 286 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 WDR38Q5JTN6 314 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 EOGTQ5NDL2 527 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 FAHD2BQ6P2I3 314 aaPredicted RBP2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 GPRIN3Q6ZVF9 776 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 MOB2Q70IA6 237 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 PGAP1Q75T13 922 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 PTAR1Q7Z6K3 402 aaPredicted RBP2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 PLCZ1Q86YW0 608 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 APRG1Q8IVJ8 170 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 CCDC50Q8IVM0 306 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 C12orf56Q8IXR9 622 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 SLC39A11Q8N1S5 342 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 KIF2BQ8N4N8 673 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 METTL27Q8N6F8 245 aaPredicted RBP2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 WDSUB1Q8N9V3 476 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 OR2T6Q8NHC8 308 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 ING5Q8WYH8 240 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 UFD1Q92890 307 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 TMEM143Q96AN5 459 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 FAM131CQ96AQ9 280 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 CCDC126Q96EE4 140 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 CNRIP1Q96F85 164 aaPredicted RBP2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 CMTM7Q96FZ5 175 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 FAHD2AQ96GK7 314 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 CLCC1Q96S66 551 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 APOL2Q9BQE5 337 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 FEM1AQ9BSK4 669 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 ACTR3CQ9C0K3 210 aaPredicted RBP2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 GFRA4Q9GZZ7 299 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms