RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 PLEKHA8Q96JA3 519 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 OSBPL10Q9BXB5 764 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 DNTTIP1Q9H147 329 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 CDC42EP4Q9H3Q1 356 aaKnown RBP3.47□□□□□ -1.85
VPS26A-206ENST00000489794 NT5MQ9NPB1 228 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 PITPNC1Q9UKF7 332 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 IKZF2Q9UKS7 526 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 VANGL2Q9ULK5 521 aa3.47□□□□□ -1.85
VPS26A-206ENST00000489794 TET2Q6N021 2002 aaPredicted RBP3.46□□□□□ -1.86
VPS26A-206ENST00000489794 A0A0B4J2A0 478 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 PRSS37A4D1T9 235 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 TEX46H3BTG2 121 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 SPOPO43791 374 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 FLOT1O75955 427 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 PAHP00439 452 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 OTCP00480 354 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 GAPDHP04406 335 aaKnown RBP3.46□□□□□ -1.86
VPS26A-206ENST00000489794 MCF2P10911 925 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 ATP5C1P36542 298 aaKnown RBP3.46□□□□□ -1.86
VPS26A-206ENST00000489794 CRYBB2P43320 205 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 RPS5P46782 204 aaKnown RBP3.46□□□□□ -1.86
VPS26A-206ENST00000489794 UBE2AP49459 152 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 FBXW4P57775 412 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 ACTA1P68133 377 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 FZD2Q14332 565 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 CHRNA6Q15825 494 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 UBE2SQ16763 222 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 KLHL40Q2TBA0 621 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 CNIH2Q6PI25 160 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 OR4C5Q8NGB2 326 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 ELMO1Q92556 727 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 CEP170P1Q96L14 293 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 MS4A4EQ96PG1 132 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 PANX2Q96RD6 677 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 SIKE1Q9BRV8 207 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 C20orf24Q9BUV8 137 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 STMN4Q9H169 189 aaPredicted RBP3.46□□□□□ -1.86
VPS26A-206ENST00000489794 PSMC3IPQ9P2W1 217 aaPredicted RBP3.46□□□□□ -1.86
VPS26A-206ENST00000489794 OR12D3Q9UGF7 316 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 SHPKQ9UHJ6 478 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 INSRP06213 1382 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 LRP4O75096 1905 aa3.46□□□□□ -1.86
VPS26A-206ENST00000489794 EIF4G1Q04637 1599 aaKnown RBP3.46□□□□□ -1.86
VPS26A-206ENST00000489794 IGLV4-60A0A075B6I1 120 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 IGKV2-28A0A075B6P5 120 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 TRAV25A0A0B4J276 109 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 A0A1W2PPE3 182 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 ANKRD63C9JTQ0 380 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 M0QX08 132 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 CCL21O00585 134 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 DLGAP1O14490 977 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 AIREO43918 545 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 NEMFO60524 1076 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 H6PDO95479 791 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 IGKV2D-28P01615 120 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 BGLAPP02818 100 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 TUBG1P23258 451 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 FGF8P55075 233 aaPredicted RBP3.45□□□□□ -1.86
VPS26A-206ENST00000489794 CLDN8P56748 225 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 AQP6Q13520 282 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 PRPSAP1Q14558 356 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 MRPL23Q16540 153 aaKnown RBP3.45□□□□□ -1.86
VPS26A-206ENST00000489794 GUCA2BQ16661 112 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 HIKESHIQ53FT3 197 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 SLC8B1Q6J4K2 584 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 TMEM53Q6P2H8 277 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 TMEM220Q6QAJ8 160 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 LYPD2Q6UXB3 125 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 THOC6Q86W42 341 aaKnown RBP3.45□□□□□ -1.86
VPS26A-206ENST00000489794 OR2G2Q8NGZ5 317 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 ACTRT1Q8TDG2 376 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 SDR42E1Q8WUS8 393 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 GEMIN6Q8WXD5 167 aaKnown RBP3.45□□□□□ -1.86
VPS26A-206ENST00000489794 SLC38A4Q969I6 547 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 ZNF707Q96C28 371 aaPredicted RBP3.45□□□□□ -1.86
VPS26A-206ENST00000489794 TSSK3Q96PN8 268 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 XKR8Q9H6D3 395 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 TUBG2Q9NRH3 451 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 MRPL22Q9NWU5 206 aaKnown RBP3.45□□□□□ -1.86
VPS26A-206ENST00000489794 TBC1D24Q9ULP9 559 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 PIK3R4Q99570 1358 aa3.45□□□□□ -1.86
VPS26A-206ENST00000489794 IGLV3-22A0A075B6J6 115 aa3.44□□□□□ -1.86
VPS26A-206ENST00000489794 ZNF324O75467 553 aaPredicted RBP3.44□□□□□ -1.86
VPS26A-206ENST00000489794 WISP3O95389 354 aaPredicted RBP3.44□□□□□ -1.86
VPS26A-206ENST00000489794 BMI1P35226 326 aa3.44□□□□□ -1.86
VPS26A-206ENST00000489794 NUP62P37198 522 aaPredicted RBP3.44□□□□□ -1.86
VPS26A-206ENST00000489794 NAMPTP43490 491 aa3.44□□□□□ -1.86
VPS26A-206ENST00000489794 CSNK1EP49674 416 aaKnown RBP3.44□□□□□ -1.86
VPS26A-206ENST00000489794 CCR8P51685 355 aa3.44□□□□□ -1.86
VPS26A-206ENST00000489794 LIPEQ05469 1076 aa3.44□□□□□ -1.86
VPS26A-206ENST00000489794 STK11Q15831 433 aa3.44□□□□□ -1.86
VPS26A-206ENST00000489794 TTLL9Q3SXZ7 439 aa3.44□□□□□ -1.86
VPS26A-206ENST00000489794 ZFP2Q6ZN57 461 aa3.44□□□□□ -1.86
VPS26A-206ENST00000489794 SLC25A48Q6ZT89 311 aaKnown RBP3.44□□□□□ -1.86
VPS26A-206ENST00000489794 DNAJC19Q96DA6 116 aa3.44□□□□□ -1.86
VPS26A-206ENST00000489794 TGS1Q96RS0 853 aaKnown RBP3.44□□□□□ -1.86
VPS26A-206ENST00000489794 BLZF1Q9H2G9 400 aa3.44□□□□□ -1.86
VPS26A-206ENST00000489794 CYP3A43Q9HB55 503 aa3.44□□□□□ -1.86
VPS26A-206ENST00000489794 CHRAC1Q9NRG0 131 aa3.44□□□□□ -1.86
VPS26A-206ENST00000489794 PEF1Q9UBV8 284 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms