RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CD79AP11912 226 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 ZNF14P17017 642 aaPredicted RBP9.64□□□□□ -0.87
CPSF7-212ENST00000489728 CAPZA2P47755 286 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 IST1P53990 364 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 CDH11P55287 796 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 PCBD1P61457 104 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 RAB1AP62820 205 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 NAAAQ02083 359 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 KEAP1Q14145 624 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 KPNB1Q14974 876 aaKnown RBP9.64□□□□□ -0.87
CPSF7-212ENST00000489728 ZNF544Q6NX49 715 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 FAHD1Q6P587 224 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 SLC22A25Q6T423 547 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 SLC16A14Q7RTX9 510 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 TMEM179BQ7Z7N9 219 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 ZDHHC13Q8IUH4 622 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 GLB1L2Q8IW92 636 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 SKA3Q8IX90 412 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 PARP8Q8N3A8 854 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 KBTBD8Q8NFY9 601 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 OR4F15Q8NGB8 312 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 LILRB1Q8NHL6 650 aaPredicted RBP9.64□□□□□ -0.87
CPSF7-212ENST00000489728 TEX47Q8TBZ9 253 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 AKAP1Q92667 903 aaKnown RBP eCLIP9.64□□□□□ -0.87
CPSF7-212ENST00000489728 CENPNQ96H22 339 aaPredicted RBP9.64□□□□□ -0.87
CPSF7-212ENST00000489728 ZNF75AQ96N20 296 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 NIPSNAP1Q9BPW8 284 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 RACGAP1Q9H0H5 632 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 GABARAPL1Q9H0R8 117 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 SYT4Q9H2B2 425 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 EGLN3Q9H6Z9 239 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 POLE4Q9NR33 117 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 BEX4Q9NWD9 120 aaPredicted RBP9.64□□□□□ -0.87
CPSF7-212ENST00000489728 REV1Q9UBZ9 1251 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 ENOPH1Q9UHY7 261 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 KLHL21Q9UJP4 597 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 TEX15Q9BXT5 2789 aa9.64□□□□□ -0.87
CPSF7-212ENST00000489728 PRR14LQ5THK1 2151 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 IGKV1D-43A0A0B4J1Z2 117 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 C12orf71A8MTZ7 269 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 G3V2T6 193 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 SLC16A7O60669 478 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 PLAUP00749 431 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 IFNGP01579 166 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 TP53P04637 393 aaPredicted RBP9.63□□□□□ -0.87
CPSF7-212ENST00000489728 SERPINA5P05154 406 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 MMP7P09237 267 aaPredicted RBP9.63□□□□□ -0.87
CPSF7-212ENST00000489728 OSMP13725 252 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 HIST1H1CP16403 213 aaKnown RBP9.63□□□□□ -0.87
CPSF7-212ENST00000489728 CTLA4P16410 223 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 CD53P19397 219 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 LAP3P28838 519 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 GRK5P34947 590 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 CDKN2AP42771 156 aaKnown RBP9.63□□□□□ -0.87
CPSF7-212ENST00000489728 ERFP50548 548 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 IDH3GP51553 393 aaPredicted RBP9.63□□□□□ -0.87
CPSF7-212ENST00000489728 LSM6P62312 80 aaKnown RBP9.63□□□□□ -0.87
CPSF7-212ENST00000489728 TUBA1BP68363 451 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 TUBA4AP68366 448 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 GLO1Q04760 184 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 PLP2Q04941 152 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 KCNMB1Q16558 191 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 SLC27A4Q6P1M0 643 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 PTCHD4Q6ZW05 846 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 TUBA1AQ71U36 451 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 ZBTB46Q86UZ6 589 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 ATG16L2Q8NAA4 619 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 NUP37Q8NFH4 326 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 OR8D4Q8NGM9 314 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 IGFBPL1Q8WX77 278 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 NSMAFQ92636 917 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 TSSK6Q9BXA6 273 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 C1QTNF6Q9BXI9 259 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 TEX12Q9BXU0 123 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 PLA2G12AQ9BZM1 189 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 UBTD1Q9HAC8 227 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 CCNB1IP1Q9NPC3 277 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 KIF17Q9P2E2 1029 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 FBXO9Q9UK97 447 aaPredicted RBP9.63□□□□□ -0.87
CPSF7-212ENST00000489728 POU2F3Q9UKI9 436 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 FKBP7Q9Y680 259 aa9.63□□□□□ -0.87
CPSF7-212ENST00000489728 CSMD2Q7Z408 3487 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 POLQO75417 2590 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 IGLV1-36A0A0B4J1U3 117 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 IGHV2OR16-5A0A0B4J2B6 119 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 A0A1W2PPL8 197 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 RIIAD1A6NNX1 92 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 H3BN98 237 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 H7C1C5 153 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 SOX14O95416 240 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 SNAP29O95721 258 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 PAX1P15863 534 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 CDAP32320 146 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 GIPRP48546 466 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 CENPAP49450 140 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 LCN6P62502 163 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 ESRRGP62508 458 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.62□□□□□ -0.87
CPSF7-212ENST00000489728 NPRL3Q12980 569 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 PGGHGQ32M88 737 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms