RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 ARHGEF9O43307 516 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 CIB2O75838 187 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 GOSR1O95249 250 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 SOX14O95416 240 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 HLA-HP01893 362 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 CELA3BP08861 270 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 SDHAP31040 664 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 HOXC12P31275 282 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 CDKN2AP42771 156 aaKnown RBP6.85□□□□□ -1.31
SSR1-210ENST00000489567 ACTR3P61158 418 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 KRR1Q13601 381 aaKnown RBP6.85□□□□□ -1.31
SSR1-210ENST00000489567 CLEC12AQ5QGZ9 265 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 C10orf128Q5T292 105 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 ADAM5Q6NVV9 412 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 SLC25A47Q6Q0C1 308 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 KLHL17Q6TDP4 642 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 ZNF704Q6ZNC4 412 aaPredicted RBP6.85□□□□□ -1.31
SSR1-210ENST00000489567 HDDC2Q7Z4H3 204 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 SKA3Q8IX90 412 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 LINC00471Q8N535 108 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 KBTBD8Q8NFY9 601 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 GIPC3Q8TF64 312 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 PYDC1Q8WXC3 89 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 ERMAPQ96PL5 475 aaPredicted RBP6.85□□□□□ -1.31
SSR1-210ENST00000489567 ALG12Q9BV10 488 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 DGCR6LQ9BY27 220 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 PAPOLBQ9NRJ5 636 aaKnown RBP6.85□□□□□ -1.31
SSR1-210ENST00000489567 ARMC1Q9NVT9 282 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 B3GNT2Q9NY97 397 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 PDP1Q9P0J1 537 aaPredicted RBP6.85□□□□□ -1.31
SSR1-210ENST00000489567 AP4S1Q9Y587 144 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 LRBAP50851 2863 aa6.85□□□□□ -1.31
SSR1-210ENST00000489567 IGHV1-18A0A0C4DH31 117 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 SLC22A23A1A5C7 686 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 PRSS37A4D1T9 235 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 A6NIZ1 184 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 SHISA9B4DS77 424 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 DCTN6O00399 190 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 BHLHE40O14503 412 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 ABCD4O14678 606 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 TXNDC12O95881 172 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 SCG5P05408 212 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 HIST1H1CP16403 213 aaKnown RBP6.84□□□□□ -1.31
SSR1-210ENST00000489567 CTLA4P16410 223 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 HOXB6P17509 224 aaKnown RBP6.84□□□□□ -1.31
SSR1-210ENST00000489567 BTF3P20290 206 aaKnown RBP6.84□□□□□ -1.31
SSR1-210ENST00000489567 CD40P25942 277 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 SLC6A6P31641 620 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 NR1H2P55055 460 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 UBE2NP61088 152 aaKnown RBP6.84□□□□□ -1.31
SSR1-210ENST00000489567 RAP1BP61224 184 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 RAP1AP62834 184 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 PIGFQ07326 219 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 ATP6AP1Q15904 470 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 OTPQ5XKR4 325 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 FAM205BPQ63HN1 556 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 GPR139Q6DWJ6 353 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 RASSF6Q6ZTQ3 369 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 AMIGO2Q86SJ2 522 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 MDP1Q86V88 176 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 SLC22A24Q8N4F4 322 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 LRTOMTQ8WZ04 291 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 NABP1Q96AH0 204 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 ZNF75AQ96N20 296 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 FOXN4Q96NZ1 517 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 TSSK2Q96PF2 358 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 IFT27Q9BW83 186 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 SYT4Q9H2B2 425 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 DENND2DQ9H6A0 471 aaPredicted RBP6.84□□□□□ -1.31
SSR1-210ENST00000489567 ESRP2Q9H6T0 727 aaKnown RBP6.84□□□□□ -1.31
SSR1-210ENST00000489567 NGBQ9NPG2 151 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 OBP2BQ9NPH6 170 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 STX18Q9P2W9 335 aaKnown RBP6.84□□□□□ -1.31
SSR1-210ENST00000489567 REV1Q9UBZ9 1251 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 MGAT4BQ9UQ53 548 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 RNF115Q9Y4L5 304 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 CDH10Q9Y6N8 788 aa6.84□□□□□ -1.31
SSR1-210ENST00000489567 ARRDC5A6NEK1 342 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 H3BNX3 289 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 ARPC3O15145 178 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 GPANK1O95872 356 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 WNT11O96014 354 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 IGKV3-15P01624 115 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 IGLV1-44P01699 117 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 CD3EP07766 207 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 CECR9P0C854 216 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 CD79AP11912 226 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 APEHP13798 732 aaKnown RBP6.83□□□□□ -1.32
SSR1-210ENST00000489567 PTAFRP25105 342 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 CAPZA2P47755 286 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 IDH3GP51553 393 aaPredicted RBP6.83□□□□□ -1.32
SSR1-210ENST00000489567 GK3PQ14409 553 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 TM4SF20Q53R12 229 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 ZNF362Q5T0B9 420 aaPredicted RBP6.83□□□□□ -1.32
SSR1-210ENST00000489567 THEM4Q5T1C6 240 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 SLC35F1Q5T1Q4 408 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 TMEM108Q6UXF1 575 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 CD300LDQ6UXZ3 194 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 B3GLCTQ6Y288 498 aa6.83□□□□□ -1.32
SSR1-210ENST00000489567 YTHDF3Q7Z739 585 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms