RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 CTLA4P16410 223 aa12.55□□□□□ -0.4
CLDN11-209ENST00000489485 SPI1P17947 270 aa12.55□□□□□ -0.4
CLDN11-209ENST00000489485 RPS7P62081 194 aaKnown RBP12.55□□□□□ -0.4
CLDN11-209ENST00000489485 APOFQ13790 326 aa12.55□□□□□ -0.4
CLDN11-209ENST00000489485 ETFDHQ16134 617 aa12.55□□□□□ -0.4
CLDN11-209ENST00000489485 CEACAM16Q2WEN9 425 aa12.55□□□□□ -0.4
CLDN11-209ENST00000489485 LINGO2Q7L985 606 aa12.55□□□□□ -0.4
CLDN11-209ENST00000489485 ZNF808Q8N4W9 903 aaPredicted RBP12.55□□□□□ -0.4
CLDN11-209ENST00000489485 NSMAFQ92636 917 aa12.55□□□□□ -0.4
CLDN11-209ENST00000489485 ZNF837Q96EG3 531 aaPredicted RBP12.55□□□□□ -0.4
CLDN11-209ENST00000489485 NMNAT2Q9BZQ4 307 aa12.55□□□□□ -0.4
CLDN11-209ENST00000489485 GPR35Q9HC97 309 aa12.55□□□□□ -0.4
CLDN11-209ENST00000489485 KCNJ16Q9NPI9 418 aa12.55□□□□□ -0.4
CLDN11-209ENST00000489485 JKAMPQ9P055 326 aa12.55□□□□□ -0.4
CLDN11-209ENST00000489485 IGKV1D-43A0A0B4J1Z2 117 aa12.54□□□□□ -0.4
CLDN11-209ENST00000489485 PRODHO43272 600 aa12.54□□□□□ -0.4
CLDN11-209ENST00000489485 AGAP20933 346 aa12.54□□□□□ -0.4
CLDN11-209ENST00000489485 CDH11P55287 796 aa12.54□□□□□ -0.4
CLDN11-209ENST00000489485 FOXG1P55316 489 aaPredicted RBP12.54□□□□□ -0.4
CLDN11-209ENST00000489485 UGT2A3Q6UWM9 527 aa12.54□□□□□ -0.4
CLDN11-209ENST00000489485 GABRG1Q8N1C3 465 aa12.54□□□□□ -0.4
CLDN11-209ENST00000489485 PROKR2Q8NFJ6 384 aa12.54□□□□□ -0.4
CLDN11-209ENST00000489485 OR6K6Q8NGW6 343 aa12.54□□□□□ -0.4
CLDN11-209ENST00000489485 OR2T4Q8NH00 348 aa12.54□□□□□ -0.4
CLDN11-209ENST00000489485 FOXN4Q96NZ1 517 aa12.54□□□□□ -0.4
CLDN11-209ENST00000489485 SNX18Q96RF0 628 aa12.54□□□□□ -0.4
CLDN11-209ENST00000489485 SH3GL3Q99963 347 aa12.54□□□□□ -0.4
CLDN11-209ENST00000489485 NDUFA13Q9P0J0 144 aa12.54□□□□□ -0.4
CLDN11-209ENST00000489485 DOPEY1Q5JWR5 2465 aa12.54□□□□□ -0.4
CLDN11-209ENST00000489485 TENM4Q6N022 2769 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 DHHO43323 396 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 LYZL6O75951 148 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 CLDN14O95500 239 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 SLC2A5P22732 501 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 IGHV1-2P23083 117 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 MPGP29372 298 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 PYCR1P32322 319 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 CENPAP49450 140 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 ASCL1P50553 236 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 CXorf67Q86X51 503 aaPredicted RBP12.53□□□□□ -0.4
CLDN11-209ENST00000489485 RFKQ969G6 155 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 NMD3Q96D46 503 aaKnown RBP12.53□□□□□ -0.4
CLDN11-209ENST00000489485 TEAD3Q99594 435 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 RHNO1Q9BSD3 238 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 TAS2R16Q9NYV7 291 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLDN11-209ENST00000489485 B9D1Q9UPM9 204 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 CIB4A0PJX0 185 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 SH3D21A4FU49 640 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 SNTNA6NMZ2 147 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 SLC1A7O00341 560 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 SEC14L2O76054 403 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 GPANK1O95872 356 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 CRABP1P29762 137 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 ZNF84P51523 738 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 SLC25A1P53007 311 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 SRSF1Q07955 248 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLDN11-209ENST00000489485 FAM27E3Q08E93 113 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 P2RY6Q15077 328 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 TSC22D1Q15714 1073 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 DNM1P34Q6PK57 102 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 LYPD4Q6UWN0 246 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 MEPCEQ7L2J0 689 aaKnown RBP12.53□□□□□ -0.4
CLDN11-209ENST00000489485 ZBTB46Q86UZ6 589 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 GID4Q8IVV7 300 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 ZMYND19Q96E35 227 aaPredicted RBP12.53□□□□□ -0.4
CLDN11-209ENST00000489485 SEC61A2Q9H9S3 476 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 GALNT8Q9NY28 637 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 ELOVL5Q9NYP7 299 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 COA3Q9Y2R0 106 aaPredicted RBP12.53□□□□□ -0.4
CLDN11-209ENST00000489485 FKBP7Q9Y680 259 aa12.53□□□□□ -0.4
CLDN11-209ENST00000489485 GCN1Q92616 2671 aaKnown RBP12.52□□□□□ -0.41
CLDN11-209ENST00000489485 SLC22A31A6NKX4 558 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 ZNF99A8MXY4 864 aaPredicted RBP12.52□□□□□ -0.41
CLDN11-209ENST00000489485 PTGES3LE9PB15 166 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 RPL36A-HNRNPH2H7BZ11 118 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 FAM20BO75063 409 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 RAD51DO75771 328 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 ITGA5P08648 1049 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 DBTP11182 482 aaKnown RBP12.52□□□□□ -0.41
CLDN11-209ENST00000489485 HTR1FP30939 366 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 MTNR1AP48039 350 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 CXCR4P61073 352 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 TEKQ02763 1124 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 TGFBR3Q03167 851 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 SLC25A47Q6Q0C1 308 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 ZNF540Q8NDQ6 660 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 LRRC46Q96FV0 321 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 RPL36Q9Y3U8 105 aaKnown RBP12.52□□□□□ -0.41
CLDN11-209ENST00000489485 ADGRG4Q8IZF6 3080 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 COL12A1Q99715 3063 aa12.52□□□□□ -0.41
CLDN11-209ENST00000489485 SPTAN1Q13813 2472 aaKnown RBP12.51□□□□□ -0.41
CLDN11-209ENST00000489485 FASNP49327 2511 aaKnown RBP12.51□□□□□ -0.41
CLDN11-209ENST00000489485 IGLV1-36A0A0B4J1U3 117 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 A0A1W2PPL8 197 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 GLCEO94923 617 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 APOL3O95236 402 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 HLA-DQA2P01906 255 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 CRHBPP24387 322 aa12.51□□□□□ -0.41
CLDN11-209ENST00000489485 GSTT1P30711 240 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms