RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 RPS6KA3P51812 740 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 ZNF133P52736 654 aaPredicted RBP11.6□□□□□ -0.55
CCL28-202ENST00000489442 LCN6P62502 163 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 HSF2Q03933 536 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 HGFACQ04756 655 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 SNTB2Q13425 540 aaKnown RBP11.6□□□□□ -0.55
CCL28-202ENST00000489442 CLEC12BQ2HXU8 276 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 GPR139Q6DWJ6 353 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 C11orf71Q6IPW1 123 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 SLC25A47Q6Q0C1 308 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 SMARCD3Q6STE5 483 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 ZER1Q7Z7L7 766 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 CLDN22Q8N7P3 220 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 NUP37Q8NFH4 326 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 FGFBP3Q8TAT2 258 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 FANK1Q8TC84 345 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 FUZQ9BT04 418 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 LRMDAQ9H2I8 198 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 MAGIXQ9H6Y5 334 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 GDF2Q9UK05 429 aaPredicted RBP11.6□□□□□ -0.55
CCL28-202ENST00000489442 IER3IP1Q9Y5U9 82 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 C2CD3Q4AC94 2353 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 CSPG4Q6UVK1 2322 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 TEX13CA0A0J9YWL9 993 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 TCRBV5S2A0A599 114 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 B9A039 149 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 H7C1Q1 480 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 SOCS2O14508 198 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 SMAD7O15105 426 aaKnown RBP11.59□□□□□ -0.55
CCL28-202ENST00000489442 AHCYL1O43865 530 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 SSX4O60224 188 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 NDUFS7O75251 213 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 IGHV4-39P01824 125 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 ZNF26P17031 533 aaPredicted RBP11.59□□□□□ -0.55
CCL28-202ENST00000489442 NR4A1P22736 598 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 THBS4P35443 961 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 NUDT6P53370 316 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 TRAP1Q12931 704 aaKnown RBP11.59□□□□□ -0.55
CCL28-202ENST00000489442 KRR1Q13601 381 aaKnown RBP11.59□□□□□ -0.55
CCL28-202ENST00000489442 ADIPOQQ15848 244 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 DPY19L2P2Q6ZN68 376 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 LINC00471Q8N535 108 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 OR1J2Q8NGS2 313 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 GNPDA2Q8TDQ7 276 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 RASD2Q96D21 266 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 BTBD10Q9BSF8 475 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 C1orf198Q9H425 327 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 RERGLQ9H628 205 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 CDH20Q9HBT6 801 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 NRIP3Q9NQ35 241 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 CMAHPQ9Y471 501 aa11.59□□□□□ -0.55
CCL28-202ENST00000489442 IGKV1D-43A0A0B4J1Z2 117 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 SLC22A23A1A5C7 686 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 PRSS37A4D1T9 235 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 TRIM64A6NGJ6 449 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 TRIM64BA6NI03 449 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 H7C417 338 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 INHBBP09529 407 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 FPR3P25089 353 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 NOS3P29474 1203 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 SDHAP31040 664 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 SLC6A6P31641 620 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 APLNRP35414 380 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 MAGEA2P43356 314 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 HMGA2P52926 109 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 PCBD1P61457 104 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 SWI5Q1ZZU3 235 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 TBC1D28Q2M2D7 210 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 MESTQ5EB52 335 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 C1orf94Q6P1W5 598 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 THSD4Q6ZMP0 1018 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 FAM122BQ7Z309 247 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 SLC30A7Q8NEW0 376 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 NMD3Q96D46 503 aaKnown RBP11.58□□□□□ -0.56
CCL28-202ENST00000489442 ZNF75AQ96N20 296 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 ERMAPQ96PL5 475 aaPredicted RBP11.58□□□□□ -0.56
CCL28-202ENST00000489442 GPA33Q99795 319 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 VRK1Q99986 396 aaPredicted RBP11.58□□□□□ -0.56
CCL28-202ENST00000489442 IFT27Q9BW83 186 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 OR52D1Q9H346 318 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 PLK3Q9H4B4 646 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 ZNF442Q9H7R0 627 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 REEP1Q9H902 201 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 UGT2A1Q9Y4X1 527 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 LYVE1Q9Y5Y7 322 aa11.58□□□□□ -0.56
CCL28-202ENST00000489442 C12orf71A8MTZ7 269 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 SLC16A7O60669 478 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 DNAJC8O75937 253 aaPredicted RBP11.57□□□□□ -0.56
CCL28-202ENST00000489442 CCNB2O95067 398 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 PPP1R3DO95685 299 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 RAP2AP10114 183 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 ZNF35P13682 527 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 MSR1P21757 451 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 CCNOP22674 350 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 LAP3P28838 519 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 RASSF2P50749 326 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 RPS23P62266 143 aaKnown RBP11.57□□□□□ -0.56
CCL28-202ENST00000489442 TSPAN31Q12999 210 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 MST1LQ2TV78 715 aa11.57□□□□□ -0.56
CCL28-202ENST00000489442 RFX4Q33E94 735 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms