RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 LIPAP38571 399 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 ETV4P43268 484 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 TNFAIP6P98066 277 aaPredicted RBP13.58□□□□□ -0.24
USP48-210ENST00000489108 PAX2Q02962 417 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 HSF2Q03933 536 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 MELKQ14680 651 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 ZMYND11Q15326 602 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 OR1Q1Q15612 314 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 TAF9Q16594 264 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 ESCO2Q56NI9 601 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 PABPC1L2AQ5JQF8 200 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 MBNL2Q5VZF2 373 aaKnown RBP13.58□□□□□ -0.24
USP48-210ENST00000489108 SORT1Q99523 831 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 ZBTB18Q99592 522 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 PRDM13Q9H4Q3 707 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 MARCH7Q9H992 704 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 TMEM27Q9HBJ8 222 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 EIF3KQ9UBQ5 218 aaKnown RBP13.58□□□□□ -0.24
USP48-210ENST00000489108 TRIM33Q9UPN9 1127 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.58□□□□□ -0.24
USP48-210ENST00000489108 DOCK11Q5JSL3 2073 aa13.58□□□□□ -0.24
USP48-210ENST00000489108 A0A0B4J2E0 115 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 A0A1B0GX12 115 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 SLC22A31A6NKX4 558 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 TSPAN15O95858 294 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 SERPINE1P05121 402 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 PGA4P0DJD7 388 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 PGA3P0DJD8 388 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 PRKAR1BP31321 381 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 BTG1P62324 171 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 HLXQ14774 488 aaPredicted RBP13.57□□□□□ -0.24
USP48-210ENST00000489108 BRD3OSQ6XYD6 125 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 POU5F2Q8N7G0 328 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 ZNF283Q8N7M2 679 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 HIPK4Q8NE63 616 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 OR10S1Q8NGN2 331 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 BBS10Q8TAM1 723 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 FAM110DQ8TAY7 271 aaPredicted RBP13.57□□□□□ -0.24
USP48-210ENST00000489108 MCHR2Q969V1 340 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 POM121L2Q96KW2 1035 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 ARHGDIGQ99819 225 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 CHIAQ9BZP6 476 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 MEAF6Q9HAF1 191 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 A4GALTQ9NPC4 353 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 PNPOQ9NVS9 261 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 TAS2R5Q9NYW4 299 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 IL20RAQ9UHF4 553 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 RNF114Q9Y508 228 aa13.57□□□□□ -0.24
USP48-210ENST00000489108 LOC100509620A0A075B734 347 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 C5orf49A4QMS7 147 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 TPST2O60704 377 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 TGDSO95455 350 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 MT-ATP6P00846 226 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 IL6P05231 212 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 WNT2P09544 360 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 ETS2P15036 469 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 SLC1A6P48664 564 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 CDH12P55289 794 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 CDK5R2Q13319 367 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 RGNQ15493 299 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 CEP85LQ5SZL2 805 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 BTNL3Q6UXE8 466 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 LRRN1Q6UXK5 716 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 SIGLEC11Q96RL6 698 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 ZNF347Q96SE7 839 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 WFDC6Q9BQY6 131 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 TMEM43Q9BTV4 400 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 NANOGQ9H9S0 305 aa13.56□□□□□ -0.24
USP48-210ENST00000489108 CEACAM18A8MTB9 384 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 C5orf58C9J3I9 102 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 SDHDO14521 159 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 RNF13O43567 381 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 TYROBPO43914 113 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 ZNF84P51523 738 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 NCALDP61601 193 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 PPP1CBP62140 327 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 NRN1LQ496H8 165 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 DHRS4L2Q6PKH6 230 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 Q6YL49 198 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 AKR7LQ8NHP1 331 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 ABHD4Q8TB40 342 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 RAB40AQ8WXH6 277 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 SAMD8Q96LT4 415 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 SSBP3Q9BWW4 388 aaPredicted RBP13.55□□□□□ -0.24
USP48-210ENST00000489108 SLC19A3Q9BZV2 496 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 CGGBP1Q9UFW8 167 aaPredicted RBP13.55□□□□□ -0.24
USP48-210ENST00000489108 LGALS13Q9UHV8 139 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 LRCH1Q9Y2L9 728 aa13.55□□□□□ -0.24
USP48-210ENST00000489108 KMT2CQ8NEZ4 4911 aaKnown RBP13.55□□□□□ -0.24
USP48-210ENST00000489108 IGHV2-70DA0A0C4DH43 119 aa13.54□□□□□ -0.24
USP48-210ENST00000489108 CH25HO95992 272 aa13.54□□□□□ -0.24
USP48-210ENST00000489108 ZNF32P17041 273 aa13.54□□□□□ -0.24
USP48-210ENST00000489108 MDH2P40926 338 aaKnown RBP13.54□□□□□ -0.24
USP48-210ENST00000489108 GDI2P50395 445 aaKnown RBP13.54□□□□□ -0.24
USP48-210ENST00000489108 RGS8P57771 180 aaPredicted RBP13.54□□□□□ -0.24
USP48-210ENST00000489108 CLRN1P58418 232 aa13.54□□□□□ -0.24
USP48-210ENST00000489108 HIST3H3Q16695 136 aa13.54□□□□□ -0.24
USP48-210ENST00000489108 MTX3Q5HYI7 312 aa13.54□□□□□ -0.24
USP48-210ENST00000489108 FAM205BPQ63HN1 556 aa13.54□□□□□ -0.24
USP48-210ENST00000489108 UNQ6126/PRO20091Q6UXV3 157 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms