RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 OR1J1Q8NGS3 322 aa15.69■□□□□ 0.1
HDAC6-231ENST00000488905 INIPQ9NRY2 104 aa15.69■□□□□ 0.1
HDAC6-231ENST00000488905 LOC105371242A0A075B767 164 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 A0A0G2JMP0 313 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 A0A0X1KG70 313 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 TPD52L2O43399 206 aaKnown RBP15.68■□□□□ 0.1
HDAC6-231ENST00000488905 MGRN1O60291 552 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 MPZL1O95297 269 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 IGF2P01344 180 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 IGHV3-13P01766 116 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 IGHV2-5P01817 119 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 ACADSP16219 412 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 AQP2P41181 271 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 GZMMP51124 257 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 TAS2R41P59536 307 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 HILS1P60008 231 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 MRPS34P82930 218 aaKnown RBP15.68■□□□□ 0.1
HDAC6-231ENST00000488905 MOGQ16653 247 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 PABPC1L2AQ5JQF8 200 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 USP43Q70EL4 1123 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 NKAIN4Q8IVV8 208 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 CPEB3Q8NE35 698 aaKnown RBP15.68■□□□□ 0.1
HDAC6-231ENST00000488905 OR4M2Q8NGB6 313 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 TMEM255BQ8WV15 326 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 NABP1Q96AH0 204 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 KCNN2Q9H2S1 579 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 NANOGQ9H9S0 305 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 SMURF2Q9HAU4 748 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 CCNB1IP1Q9NPC3 277 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 C20orf141Q9NUB4 165 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 DECR2Q9NUI1 292 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 STX18Q9P2W9 335 aaKnown RBP15.68■□□□□ 0.1
HDAC6-231ENST00000488905 PCDHB10Q9UN67 800 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 WIPI2Q9Y4P8 454 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 UGT2A1Q9Y4X1 527 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 CACNG2Q9Y698 323 aa15.68■□□□□ 0.1
HDAC6-231ENST00000488905 PLPP2O43688 288 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 AVPP01185 164 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 TSPAN19P0C672 248 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 FUT1P19526 365 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 TNFRSF1BP20333 461 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 CCNOP22674 350 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 STOMP27105 288 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 CDAP32320 146 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 FMODQ06828 376 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 TSTQ16762 297 aaKnown RBP15.67■□□□□ 0.1
HDAC6-231ENST00000488905 FAM209AQ5JX71 171 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 ARMC4Q5T2S8 1044 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 ZNF101Q8IZC7 436 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 IPCEF1Q8WWN9 437 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-231ENST00000488905 NMD3Q96D46 503 aaKnown RBP15.67■□□□□ 0.1
HDAC6-231ENST00000488905 SGTBQ96EQ0 304 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 TMPRSS13Q9BYE2 586 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 POLR2J2Q9GZM3 115 aaKnown RBP15.67■□□□□ 0.1
HDAC6-231ENST00000488905 POLR2J3Q9H1A7 115 aaKnown RBP15.67■□□□□ 0.1
HDAC6-231ENST00000488905 SIAEQ9HAT2 523 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 INTS9Q9NV88 658 aaKnown RBP15.67■□□□□ 0.1
HDAC6-231ENST00000488905 SH3GLB1Q9Y371 365 aa15.67■□□□□ 0.1
HDAC6-231ENST00000488905 NPIPB13A6NJU9 1138 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 NPIPB4C9JG80 1138 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 OR5F1O95221 314 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 ZNF32P17041 273 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 WNT5AP41221 380 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 COMPP49747 757 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-231ENST00000488905 ZNF81P51508 661 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 CD47Q08722 323 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 HFEQ30201 348 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 TMEM255AQ5JRV8 349 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 SPATA46Q5T0L3 261 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 C1QL2Q7Z5L3 287 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 MOSPD2Q8NHP6 518 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 FAM216AQ8WUB2 273 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 TMEM239Q8WW34 195 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 HDAC2Q92769 488 aaKnown RBP15.66■□□□□ 0.1
HDAC6-231ENST00000488905 ELMOD3Q96FG2 381 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 TIMD4Q96H15 378 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 POM121L2Q96KW2 1035 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 PLA2G12AQ9BZM1 189 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 NPHS2Q9NP85 383 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 BAG5Q9UL15 447 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 MGAM2Q2M2H8 2515 aa15.66■□□□□ 0.1
HDAC6-231ENST00000488905 IGKV1D-43A0A0B4J1Z2 117 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 C5orf49A4QMS7 147 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 SHOX2O60902 331 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-231ENST00000488905 IGHV1-46P01743 117 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 NR2C1P13056 603 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 MAKP20794 623 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 GCH1P30793 250 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 MPV17P39210 176 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 MMP15P51511 669 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 ARFIP2P53365 341 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 ZNF718Q3SXZ3 478 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 NANOGP8Q6NSW7 305 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 RFPL4BQ6ZWI9 263 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 PEG10Q86TG7 708 aaKnown RBP15.65■□□□□ 0.1
HDAC6-231ENST00000488905 CALHM3Q86XJ0 350 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 LIPHQ8WWY8 451 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 RAB1CQ92928 201 aa15.65■□□□□ 0.1
HDAC6-231ENST00000488905 MARS2Q96GW9 593 aaKnown RBP15.65■□□□□ 0.1
HDAC6-231ENST00000488905 MAGEB18Q96M61 343 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms