RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 N6AMT1Q9Y5N5 214 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 IKBKGQ9Y6K9 419 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 ADAMTS13Q76LX8 1427 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 C17orf51A8MQB3 221 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 K7EQM0 130 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 CHST1O43916 411 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 GCM2O75603 506 aaPredicted RBP2.04□□□□□ -2.08
PTPN4-212ENST00000488896 RAB3DO95716 219 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 GUCA1CO95843 209 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 FBN1P35555 2871 aaKnown RBP2.04□□□□□ -2.08
PTPN4-212ENST00000488896 TGFBR1P36897 503 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 HSD17B2P37059 387 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 PRRX1P54821 245 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 NID2Q14112 1375 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 ARHGAP19Q14CB8 494 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 KCTD21Q4G0X4 260 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 ARL9Q6T311 187 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 UQCC3Q6UW78 93 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 LKAAEAR1Q8TD35 194 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 MTMR9Q96QG7 549 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 PANX2Q96RD6 677 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 ZNF607Q96SK3 696 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 KCTD14Q9BQ13 255 aaPredicted RBP2.04□□□□□ -2.08
PTPN4-212ENST00000488896 TMEM59Q9BXS4 323 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 CDHR2Q9BYE9 1310 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 DDX19AQ9NUU7 478 aaKnown RBP2.04□□□□□ -2.08
PTPN4-212ENST00000488896 ZNF391Q9UJN7 358 aa2.04□□□□□ -2.08
PTPN4-212ENST00000488896 PTBP2Q9UKA9 531 aaKnown RBP2.04□□□□□ -2.08
PTPN4-212ENST00000488896 TRAV39A0A0B4J263 110 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 CCL21O00585 134 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 ANGPT2O15123 496 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 CT62P0C5K7 136 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 P0C880 135 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 PSMA5P28066 241 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 CXCL12P48061 93 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 PLET1Q6UQ28 207 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 TEX43Q6ZNM6 134 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 DHDDSQ86SQ9 333 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 OR4K5Q8NGD3 323 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 OR2T3Q8NH03 318 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 OR1P1Q8NH06 330 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 FLYWCH2Q96CP2 140 aaKnown RBP2.03□□□□□ -2.08
PTPN4-212ENST00000488896 COPS8Q99627 209 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 TCHPQ9BT92 498 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 RMND5AQ9H871 391 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 MMACHCQ9Y4U1 282 aa2.03□□□□□ -2.08
PTPN4-212ENST00000488896 VGLL3A8MV65 326 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 C16orf90A8MZG2 172 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 NOL3O60936 208 aaKnown RBP2.02□□□□□ -2.09
PTPN4-212ENST00000488896 EIF3GO75821 320 aaKnown RBP eCLIP2.02□□□□□ -2.09
PTPN4-212ENST00000488896 HLA-DQA1P01909 254 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 DESP17661 470 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 MRPL28Q13084 256 aaKnown RBP2.02□□□□□ -2.09
PTPN4-212ENST00000488896 BAMBIQ13145 260 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 SRSF5Q13243 272 aaKnown RBP2.02□□□□□ -2.09
PTPN4-212ENST00000488896 IL15RAQ13261 267 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 PON2Q15165 354 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 PTPN20Q4JDL3 420 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 TMEM205Q6UW68 189 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 UNQ9165/PRO28630Q6UXU0 137 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 OR13G1Q8NGZ3 307 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 CIRBP-AS1Q8TBR5 109 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 EMG1Q92979 244 aaKnown RBP2.02□□□□□ -2.09
PTPN4-212ENST00000488896 C10orf35Q96D05 121 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 RPRD1AQ96P16 312 aaPredicted RBP2.02□□□□□ -2.09
PTPN4-212ENST00000488896 PARD6BQ9BYG5 372 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 MFFQ9GZY8 342 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 PARP12Q9H0J9 701 aaKnown RBP2.02□□□□□ -2.09
PTPN4-212ENST00000488896 SAV1Q9H4B6 383 aaPredicted RBP2.02□□□□□ -2.09
PTPN4-212ENST00000488896 FN3KRPQ9HA64 309 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 SH3BGRL2Q9UJC5 107 aa2.02□□□□□ -2.09
PTPN4-212ENST00000488896 F6UB75 175 aa2.01□□□□□ -2.09
PTPN4-212ENST00000488896 YIF1AO95070 293 aa2.01□□□□□ -2.09
PTPN4-212ENST00000488896 DTYMKP23919 212 aa2.01□□□□□ -2.09
PTPN4-212ENST00000488896 AQP2P41181 271 aa2.01□□□□□ -2.09
PTPN4-212ENST00000488896 ZNF138P52744 262 aa2.01□□□□□ -2.09
PTPN4-212ENST00000488896 ASCL5Q7RTU5 278 aa2.01□□□□□ -2.09
PTPN4-212ENST00000488896 HSD17B11Q8NBQ5 300 aa2.01□□□□□ -2.09
PTPN4-212ENST00000488896 LILRB4Q8NHJ6 448 aa2.01□□□□□ -2.09
PTPN4-212ENST00000488896 TSGA13Q96PP4 275 aa2.01□□□□□ -2.09
PTPN4-212ENST00000488896 FMO2Q99518 471 aa2.01□□□□□ -2.09
PTPN4-212ENST00000488896 ERP44Q9BS26 406 aa2.01□□□□□ -2.09
PTPN4-212ENST00000488896 NMRAL1Q9HBL8 299 aa2.01□□□□□ -2.09
PTPN4-212ENST00000488896 A0A0U1RQV1 116 aa2□□□□□ -2.09
PTPN4-212ENST00000488896 SPECC1L-ADORA2AF8WAN1 911 aa2□□□□□ -2.09
PTPN4-212ENST00000488896 GOLGA8SH3BPF8 625 aa2□□□□□ -2.09
PTPN4-212ENST00000488896 CLDN9O95484 217 aa2□□□□□ -2.09
PTPN4-212ENST00000488896 AIFM1O95831 613 aa2□□□□□ -2.09
PTPN4-212ENST00000488896 C2P06681 752 aa2□□□□□ -2.09
PTPN4-212ENST00000488896 CD1CP29017 333 aa2□□□□□ -2.09
PTPN4-212ENST00000488896 GRIA1P42261 906 aa2□□□□□ -2.09
PTPN4-212ENST00000488896 FGL1Q08830 312 aa2□□□□□ -2.09
PTPN4-212ENST00000488896 AP1ARQ63HQ0 302 aa2□□□□□ -2.09
PTPN4-212ENST00000488896 SPECC1LQ69YQ0 1117 aa2□□□□□ -2.09
PTPN4-212ENST00000488896 GMCL1P1Q8NEA9 526 aa2□□□□□ -2.09
PTPN4-212ENST00000488896 OR9A2Q8NGT5 310 aa2□□□□□ -2.09
PTPN4-212ENST00000488896 SCFD1Q8WVM8 642 aa2□□□□□ -2.09
PTPN4-212ENST00000488896 ZCCHC13Q8WW36 166 aaKnown RBP2□□□□□ -2.09
PTPN4-212ENST00000488896 LHX5Q9H2C1 402 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms