RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 AQP11Q8NBQ7 271 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 GIPC3Q8TF64 312 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 GTPBP3Q969Y2 492 aaKnown RBP13.09□□□□□ -0.31
CXCL12-207ENST00000488591 RASD2Q96D21 266 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 MS4A3Q96HJ5 214 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 SAMD8Q96LT4 415 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 CXXC4Q9H2H0 198 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 CCNB1IP1Q9NPC3 277 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 METRNQ9UJH8 293 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 SPEF1Q9Y4P9 236 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 CDH10Q9Y6N8 788 aa13.09□□□□□ -0.31
CXCL12-207ENST00000488591 CSMD2Q7Z408 3487 aa13.08□□□□□ -0.31
CXCL12-207ENST00000488591 CSMD1Q96PZ7 3565 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 A0A1W2PPL8 197 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 ARPC3O15145 178 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 E2F6O75461 281 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 PTHP01270 115 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 CELA3BP08861 270 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 DANCRP0C864 163 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 PATE4P0C8F1 98 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 APOBEC3AP31941 199 aaPredicted RBP13.08□□□□□ -0.32
CXCL12-207ENST00000488591 CDAP32320 146 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 TTKP33981 857 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 ARHGDIAP52565 204 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 PLP2Q04941 152 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 TESK1Q15569 626 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 ZNF620Q6ZNG0 422 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 RASSF6Q6ZTQ3 369 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 LRRC75A-AS1Q8N1F1 130 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 PAPD5Q8NDF8 572 aaKnown RBP13.08□□□□□ -0.32
CXCL12-207ENST00000488591 OR10G2Q8NGC3 310 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 DGCR6LQ9BY27 220 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 VNN3Q9NY84 501 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 ZNF224Q9NZL3 707 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 DNAJB9Q9UBS3 223 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 UGT2A1Q9Y4X1 527 aa13.08□□□□□ -0.32
CXCL12-207ENST00000488591 IGKV1D-43A0A0B4J1Z2 117 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 IQCMA0A1B0GVH7 501 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 SLC16A7O60669 478 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 KHDRBS3O75525 346 aaKnown RBP13.07□□□□□ -0.32
CXCL12-207ENST00000488591 RENP00797 406 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 SERPINA5P05154 406 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 SOD3P08294 240 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 BMP4P12644 408 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 ZNF14P17017 642 aaPredicted RBP13.07□□□□□ -0.32
CXCL12-207ENST00000488591 ERFP50548 548 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 NKX6-1P78426 367 aaPredicted RBP13.07□□□□□ -0.32
CXCL12-207ENST00000488591 COX10Q12887 443 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 RAB39AQ14964 217 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 PGGHGQ32M88 737 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 FAM27BQ5VT28 67 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 DNM1P34Q6PK57 102 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 B3GLCTQ6Y288 498 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 SPNS3Q6ZMD2 512 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 MUC15Q8N387 334 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 HTRA1Q92743 480 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 TRMT61AQ96FX7 289 aaKnown RBP13.07□□□□□ -0.32
CXCL12-207ENST00000488591 GRIP2Q9C0E4 1043 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 SYT4Q9H2B2 425 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 C1orf198Q9H425 327 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 RERGLQ9H628 205 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 EGLN3Q9H6Z9 239 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 NOX3Q9HBY0 568 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 IL20Q9NYY1 176 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 VSX1Q9NZR4 365 aaPredicted RBP13.07□□□□□ -0.32
CXCL12-207ENST00000488591 OTOGQ6ZRI0 2925 aa13.07□□□□□ -0.32
CXCL12-207ENST00000488591 IGHV2OR16-5A0A0B4J2B6 119 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 ARRDC5A6NEK1 342 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 C12orf71A8MTZ7 269 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 DEAF1O75398 565 aaPredicted RBP13.06□□□□□ -0.32
CXCL12-207ENST00000488591 CST2P09228 141 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 PAX1P15863 534 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 MSR1P21757 451 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 CRABP1P29762 137 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 CALCRP30988 508 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 CDKN2AP42771 156 aaKnown RBP13.06□□□□□ -0.32
CXCL12-207ENST00000488591 PCBD1P61457 104 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 GALK2Q01415 458 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 HSF2Q03933 536 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 CLEC12AQ5QGZ9 265 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 FOXL2NBQ6ZUU3 175 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 ASRGL1Q7L266 308 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 DTX2Q86UW9 622 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 MYPOPQ86VE0 399 aaPredicted RBP13.06□□□□□ -0.32
CXCL12-207ENST00000488591 NUP37Q8NFH4 326 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 OR1J2Q8NGS2 313 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 FGFBP3Q8TAT2 258 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 IGFBPL1Q8WX77 278 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 NABP1Q96AH0 204 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 SLCO4A1Q96BD0 722 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 PERPQ96FX8 193 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 ZNF75AQ96N20 296 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 SNX18Q96RF0 628 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 FEVQ99581 238 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 WACQ9BTA9 647 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 TRAF4Q9BUZ4 470 aaPredicted RBP13.06□□□□□ -0.32
CXCL12-207ENST00000488591 GSX2Q9BZM3 304 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 ZNF556Q9HAH1 456 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 CBLN4Q9NTU7 201 aa13.06□□□□□ -0.32
CXCL12-207ENST00000488591 TBC1D23Q9NUY8 699 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms